EBG00000313339 - n.2962C>T


Drug resistance types
250 Sensitive 59 RR-TB 64 HR-TB 93 MDR-TB 33 Pre-XDR-TB 1 XDR-TB 213 Other
lineage Counts
lineage Count
lineage4.3.4.1 10
lineage4.1.2.1;lineage4.4.1 1
lineage4.3.4.2.1 20
lineage4.9 219
lineage4.8 28
lineage4.5 4
lineage2.2.1 80
lineage4.1.1.3;lineage4.9 3
lineage1.2.2.1;lineage4.4.1.1 2
lineage4.4.1.1 16
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.2.1 15
La1.8.1 10
lineage4.4.1.1.1 4
lineage4.1.2.1 15
lineage4.3.3 20
lineage6.1.1 3
lineage1.1.3.2 4
lineage6.1.3 2
lineage3 20
lineage3.1.2.1 3
lineage4.3.4.2 4
M.canetti;lineage4.2;lineage4.9 2
La1.7;lineage4.9 3
lineage4.4.1.2 4
lineage4.6.3;lineage4.9 1
lineage2.2.2 13
lineage4.1.1.1 9
lineage4.2.1 4
lineage4.1.1.3 12
lineage4.3.3;lineage4.8 4
lineage4.1.2 11
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.8.1 5
lineage4 6
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage9 2
La2 1
La1.6 4
La1;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 3
lineage4.9;lineage5.1.1 1
M.canetti;lineage4.9 2
lineage5.1.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.2 3
lineage4.2;lineage4.9 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.1.2 5
lineage2.2.1;lineage4 3
lineage3.1.1 6
lineage2.2.1.1 5
lineage3.1.3 1
lineage4.1 1
lineage1.1.1 2
lineage4.9;lineage6.1.3 1
lineage1.2.2.2 2
lineage4.4.2 4
lineage1.1.3.1 1
lineage4.9.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
La1.3 5
lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La2;lineage4.9 1
lineage1.1.2;lineage4 1
La1.7.1 2
lineage1.2.1.1 1
lineage4.3.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1.2 1
lineage4.2.2.2 2
lineage4.1.3 2
lineage2.2.1;lineage4.9 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.1;lineage4.9 1
lineage1.2.2 2
lineage3.1.2.2 1
lineage3.1.2.1;lineage4.9 1
lineage4.1.2.1.1 1
lineage1.2.1.2 1
lineage3;lineage4 1
lineage6.3.1 1
lineage4.7 3
lineage4.1.1.3.1;lineage4.9 1
lineage4.6.1.1 1
La1.7;lineage4.3.4.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 1
M.canetti;lineage2.1 1
La1.4 1
lineage4.2.1.1 1
lineage4.3.4.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.2.1;lineage4.4.2 1
lineage4.2.2 1
6
lineage4.3.3;lineage4.9 1
lineage1.1.2;lineage6.2.3 1
lineage1 1
La1.7 1
lineage4.1;lineage4.9 2
lineage5.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage1.1.1;lineage4 1
lineage4.6.4 1
lineage3.1.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
lineage4.6.5 1
lineage1.2.1.2.1 1
lineage4.1.2.1;lineage4.4.1.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.9;lineage7 1
lineage1.1.1.1 1
lineage4.6.2.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2;lineage4 1
La1.8.X-unk6 1
spoligotype Counts
spoligotype Count
None 713
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6982050 Other lineage4.3.4.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
ERR349300 Other lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR4820151 Other lineage4.8 None
ERR752229 Other lineage4.5 None
SRR1049675 HR-TB lineage2.2.1 None
ERR323061 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR161047 Sensitive lineage4.4.1.1 None
ERR363449 Other lineage4.9 None
SRR6982178 Sensitive lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR3743401 MDR-TB lineage2.2.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR373945 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769530 RR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR6982077 Sensitive lineage4.3.2.1 None
SRR1792378 Other La1.8.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR6982057 HR-TB lineage4.3.3 None
ERR363499 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
ERR9787014 RR-TB lineage6.1.1 None
ERR400320 Sensitive lineage4.9 None
ERR161201 Sensitive lineage1.1.3.2 None
SRR1180420 Sensitive lineage4.9 None
ERR9787079 Other lineage6.1.3 None
ERR9786076 Other lineage3 None
SRR7069391 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR10796628 Other lineage4.3.3 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR21657198 HR-TB lineage4.3.3 None
SRR6045832 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR3675552 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR17567887 Sensitive lineage4.4.1.2 None
ERR3797015 HR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR2513259 Other lineage3 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR1873463 MDR-TB lineage2.2.2 None
SRR4034393 MDR-TB lineage4.1.2.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR1873561 XDR-TB lineage2.2.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR176450 Sensitive lineage4.1.1.3 None
ERR176780 Sensitive lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR067712 Sensitive lineage4.9 None
ERR176475 Sensitive lineage4.3.4.2.1 None
SRR11342682 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR9971150 RR-TB lineage4.8.1 None
ERR867573 Other lineage4.9 None
ERR161125 Sensitive lineage4 None
SRR3725594 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4769508 RR-TB lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4816762 Sensitive lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR1062859 Sensitive lineage2.2.1 None
SRR6982227 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
ERR349265 Other lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR1063855 Other lineage4.9 None
ERR176781 Sensitive lineage1.1.3.2 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6789621 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR22424787 Sensitive lineage4.9 None
SRR10993944 Other La1.6 None
SRR1175052 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
SAMN02350437 MDR-TB lineage4.8 None
SRR11294512 Other La1.8.1 None
SRR11972188 MDR-TB lineage2.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR6981981 Sensitive lineage4.3.3 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR6982410 Sensitive lineage4.8.1 None
SRR1172807 Sensitive lineage4.9 None
ERR190339 Sensitive lineage4.3.4.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR6982102 Sensitive lineage2.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR6982385 Sensitive lineage4.1.2 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4816549 Other lineage2.2.1 None
SAMN02585910 RR-TB lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR1082134 Sensitive lineage5.1.1 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR1181136 Sensitive lineage2.2.1 None
SRR6046385 Sensitive lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR216953 Sensitive lineage4.3.4.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4769427 Other La1.2 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6981993 Sensitive lineage4.3.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR11972387 MDR-TB lineage2.2.1 None
ERR4769493 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1175496 Sensitive lineage4.9 None
ERR4819017 Other lineage3 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
ERR4819579 HR-TB lineage4.3.3 None
SRR6981968 Sensitive lineage4.1.2 None
SRR1181256 Other lineage4.9 None
SRR6982257 Sensitive lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR502481 RR-TB lineage4.9 None
ERR1023250 Sensitive lineage6.1.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR1873476 Pre-XDR-TB lineage2.2.2 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR3283055 HR-TB lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR181940 Sensitive lineage3.1.1 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR363474 Sensitive lineage4.9 None
SRR6981918 Sensitive lineage4.4.1.1 None
ERR10796633 Other lineage4.3.4.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR1173385 Sensitive lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
ERR4769433 RR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR1173633 Other lineage4.9 None
SRR6982168 Sensitive lineage4.4.1.1 None
ERR9786498 Sensitive lineage4.1.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6832787 Other lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR3725591 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR3335798 MDR-TB lineage2.2.1 None
SRR6046245 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4816610 Other lineage4.3.3 None
ERR369163 Other lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR3675210 Sensitive lineage4.9 None
ERR3324345 RR-TB lineage4.1 None
ERR718268 Sensitive lineage1.1.1 None
ERR228175 Sensitive lineage3 None
SRR2101693 Sensitive lineage4.1.2 None
SRR1011480 MDR-TB lineage4.8 None
SRR5341345 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR6982048 Sensitive lineage4.3.2.1 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR17832802 HR-TB lineage3 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR11342686 MDR-TB lineage4.8 None
SRR2101529 Sensitive lineage4.3.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR978765 RR-TB lineage4.8 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR2660495 Sensitive lineage1.2.2.2 None
ERR6865502 Sensitive lineage4 None
SRR20969542 Other lineage4.4.2 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR1140736 Other lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
ERR161184 Sensitive lineage4.3.4.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR9786558 Other lineage4.3.4.2 None
SRR6982229 Sensitive lineage2.2.1 None
ERR349330 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR216928 Other lineage4.9.1 None
ERR3799304 RR-TB lineage6.1.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR216901 Other lineage3.1.1 None
ERR5758436 Other lineage2.2.2 None
SRR6982508 Sensitive lineage4.9 None
SRR6982514 Sensitive lineage4.3.3 None
ERR4821796 Other lineage4.1.1.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816470 HR-TB lineage3 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR6855695 Sensitive lineage4.8 None
ERR751729 Other lineage1.1.1 None
ERR502473 RR-TB lineage4.9 None
SRR1181328 Other lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4821286 Other lineage4.8 None
SRR1062851 MDR-TB lineage4.8 None
ERR349264 Other lineage4.9 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR6785301 Sensitive lineage2.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR1175474 Other lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR502517 Other lineage5.1.1 None
ERR4820829 Other lineage4.8 None
SRR6045371 Other lineage4.9 None
SRR2101803 Sensitive lineage4.3.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR6982342 Sensitive lineage4.3.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR1140716 Other lineage3 None
SRR1180250 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR037501 Sensitive lineage4.3.4.2.1 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4816417 Other lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6982328 Other lineage3.1.1 None
ERR4821704 Other lineage4.3.3 None
SRR1184308 RR-TB lineage4.9 None
SRR3725599 Sensitive lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR2101663 Sensitive lineage1.1.3.2 None
ERR736831 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4769497 Other La1;lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR181708 RR-TB lineage1.1.2;lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1792232 Other La1.7.1 None
SRR1181368 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1792247 Other La1.7.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
ERR4769518 Sensitive lineage4.9 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR867566 Other lineage4.9 None
ERR4822261 RR-TB lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR5341330 Other lineage4.9 None
SRR6982115 Sensitive lineage4.3.2 None
SRR1180345 Other lineage4.9 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR3725588 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR736805 Sensitive lineage2.2.1 None
ERR369158 Other lineage4.9 None
ERR363421 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR212033 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6855917 Sensitive lineage4.8 None
SRR11462861 Other La1.8.1 None
ERR10796564 Other lineage4.3.3 None
ERR216930 Sensitive lineage4.3.4.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046117 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR6046141 Other lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR1208447 Sensitive lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
ERR176741 Other lineage4.9 None
ERR1465744 Sensitive lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR987719 HR-TB lineage3 None
SRR6981912 Sensitive lineage4.3.2.1 None
SRR3725590 Sensitive lineage4.9 None
SRR2101312 MDR-TB lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR4033203 Sensitive lineage4.9 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6982070 Sensitive lineage2.2.1;lineage4.9 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6855718 Other lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4819876 Other lineage4.3.4.2.1 None
ERR4769514 Other La1.3 None
ERR2229198 Sensitive lineage4.8 None
ERR4798823 HR-TB lineage4 None
ERR736822 Sensitive lineage4.4.1.2 None
SRR6046897 Sensitive lineage4.9 None
SRR6982297 Sensitive lineage4.1.1.1;lineage4.9 None
ERR4818126 Other lineage1.2.2 None
ERR4821263 Other lineage4.1.3 gb
ERR4818988 Other lineage1.2.2 None
SRR1180312 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR7535044 Pre-XDR-TB lineage4.6.1.2 None
ERR867554 Other lineage4.3.4.1 None
SRR3675548 Sensitive lineage4.9 None
ERR216910 Sensitive lineage4.3.4.2.1 None
SRR21714045 Other lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR3725595 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
SRR7069835 Other lineage2.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811031 Other lineage4.5 None
SRR21675637 Sensitive lineage4.3.3 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR400336 Sensitive lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR4811030 Other lineage4.9 None
ERR9786258 Sensitive lineage4.3.4.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6856032 Sensitive lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502480 Other lineage5.1.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
SRR20969475 Other lineage1.2.1.2 None
ERR2446566 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
ERR4818440 Other lineage6.3.1 None
SRR10993957 Other La1.6 None
SRR3725593 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR6855721 Sensitive lineage4.3.2.1 None
ERR4814976 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR7240506 Other La1.8.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1180977 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
ERR4819622 Other lineage4.1.2.1 None
ERR4769506 Sensitive lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR502474 RR-TB lineage4.9 None
SRR6982337 Sensitive lineage4.7 None
ERR978767 RR-TB lineage4.8 None
SRR1183111 HR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR867567 RR-TB lineage3 None
ERR4819462 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR3675509 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR7654036 Sensitive lineage4.8 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363502 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR1182885 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR21737226 Sensitive lineage4.5 None
SRR7655615 Sensitive lineage4.8 None
SRR6981975 Sensitive lineage4.7 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR12634609 MDR-TB lineage3.1.1 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR1873461 Pre-XDR-TB lineage2.2.2 None
ERR4821679 Other lineage4.3.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR1181319 Sensitive lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
ERR4814709 Other lineage4.1.1.1 None
SRR5067224 Sensitive lineage4.4.2 vn
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR1181397 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR502470 RR-TB lineage4.9 None
SRR7240537 Other La1.8.1 None
SRR7655613 Sensitive lineage4.8 None
SRR1173310 Other lineage3.1.1 None
SRR1180413 Sensitive lineage4.9 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR16278274 Other La1.4 None
SRR1011488 Sensitive lineage2.2.1 None
SRR6785281 Other lineage4.2.1.1 None
ERR216950 Sensitive lineage1.1.3.2 None
ERR473323 HR-TB lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR3675260 Sensitive lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR473303 Sensitive lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR2101617 Sensitive lineage4.1.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR369159 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4831841 HR-TB lineage2.2.1;lineage4.4.2 None
ERR363446 Other lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR27069420 Pre-XDR-TB lineage4.2.2 None
ERR4796577 HR-TB None
ERR4817060 Other None
SRR5341296 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR12708372 Sensitive lineage4.9 None
ERR137226 MDR-TB lineage2.2.1 None
ERR363509 Sensitive lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6044876 Sensitive lineage4.9 None
SRR1238557 Other lineage4.9 None
SRR6982056 Other lineage4.3.4.2.1 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR5152904 Other lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR6982198 HR-TB lineage1 None
ERR10796598 Other lineage4.9 None
SRR4033549 Other lineage2.2.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR6982011 Sensitive lineage4.1.1.1 None
ERR4821054 Sensitive lineage3 None
SRR6046259 Sensitive lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR736818 Sensitive lineage4.3.3 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR1208604 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR1873437 HR-TB lineage2.2.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR10993953 Other La1.6 None
SRR1175506 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR4815815 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR1679639 Other lineage4.6.4 None
ERR2515230 Sensitive lineage4.8 None
ERR144568 Sensitive None
SRR12708416 Sensitive None
ERR216949 Sensitive lineage4.3.4.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR161170 Sensitive lineage4.3.4.1 None
SRR1181085 Sensitive lineage4.1.2 None
ERR363498 Other lineage4.9 None
SRR6855915 Sensitive lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR6855963 Sensitive lineage2.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6896255 Sensitive lineage4.3.3 None
SRR11342646 HR-TB lineage3 None
SRR13199734 Other La1.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6982414 Sensitive lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR2179695 Sensitive lineage4.5 None
SRR1183054 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR4814745 Other lineage4.6.5 None
SRR1175513 Sensitive lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
ERR4816464 Other lineage3 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR978766 RR-TB lineage4.8 None
SRR10869017 Pre-XDR-TB lineage4.3.3 None
SRR1173281 Other lineage3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR1173170 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR363490 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6982484 Other lineage3.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4769418 Other La1.2 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
ERR867538 Other lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR4769516 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR6982138 Sensitive lineage4.1.1.3 None
SRR18003024 RR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR6981962 Sensitive lineage4.3.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR1175512 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR363447 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR6982058 HR-TB lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR6855851 Other lineage4.3.4.2.1 None
ERR373947 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR7240147 Other La1.8.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
DRR184913 Sensitive lineage2.2.1 None
ERR4769555 Sensitive La1.3 None
SRR12199468 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR1173185 Other lineage4.9 None
ERR867571 Other lineage4.9 None
ERR363500 Other lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1173770 Other lineage4.9 None
SRR3725597 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR6865513 Other lineage4.1.2.1 None
SRR7240420 Other La1.8.X-unk6 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR1182994 Sensitive lineage4.1.2 None
ERR11465360 MDR-TB lineage4.3.4.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR6485171 RR-TB lineage4.8 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR2100532 Sensitive lineage3 None
SRR6045503 Other lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
ERR867569 Other lineage4.9 None
SRR6982418 Sensitive lineage4.1.1.3 None
ERR363456 Sensitive lineage4.9 None
SRR6982196 Sensitive None
ERR987722 MDR-TB None