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SRA data
EBG00000313325
- n.453_465delGTCCGGGTTCTCT
Drug resistance types
81 Sensitive
22 RR-TB
47 HR-TB
12 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
119
lineage2.2.1
30
lineage4.8
7
La3;lineage4.9
5
lineage3
5
La1.8.1
4
lineage4.1.1.3
4
lineage4.3.3
3
lineage4.1.2.1
3
lineage2.2.2
3
Showing 1 to 10 of 58 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
244
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR184629
Other
lineage2.2.1
None
DRR185000
Other
lineage1.1.1.1
None
DRR185024
Other
lineage2.2.2
None
ERR1023509
Other
lineage4.9
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1034634
HR-TB
lineage4.9
None
ERR1063846
HR-TB
lineage4.9
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
Showing 1 to 10 of 244 entries
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