Rv3596c - c.615T>G
Drug resistance types
10 Sensitive
12 RR-TB
19 HR-TB
15 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 16 |
| lineage4.7 | 4 |
| lineage4.3.3 | 1 |
| lineage4.9 | 20 |
| lineage4 | 8 |
| lineage4.4 | 1 |
| La1.4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.5 | 2 |
| lineage2.2 | 2 |
| lineage4.5;lineage4.4.2 | 1 |
| 5 | |
| lineage4.8 | 1 |
| lineage3 | 3 |
| lineage4;lineage2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16278274 | Other | La1.4 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18500595 | Sensitive | lineage4.5 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969740 | Sensitive | lineage4.5;lineage4.4.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4815550 | Other | lineage4 | None | ERR4817069 | RR-TB | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | SRR7341667 | MDR-TB | lineage4.7 | ro | ERR4817204 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR7341641 | MDR-TB | lineage4.7 | ro | ERR4816762 | Other | lineage4;lineage2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR5535933 | HR-TB | None | ERR4821276 | Other | lineage3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR387051 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769508 | RR-TB | lineage4.9 | None |
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