EBG00000313325 - n.992C>T
Drug resistance types
10 Sensitive
8 RR-TB
9 HR-TB
2 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 6 |
| lineage4.9 | 17 |
| lineage2.2.1 | 18 |
| lineage4.6.4 | 1 |
| lineage4.8 | 3 |
| La1.8.1 | 1 |
| lineage4.1.2 | 2 |
| lineage3 | 12 |
| lineage2.2.2 | 1 |
| lineage3.1.3 | 2 |
| lineage1.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.8.1 | 1 |
| La1.3 | 8 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR702437 | HR-TB | lineage4.6.4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1188130 | Sensitive | lineage4.1.2 | ca | SRR13180204 | Sensitive | lineage3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18913779 | Other | lineage3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR1750929 | Sensitive | lineage4.1.1.3 | za | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4817109 | Other | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR4817243 | Sensitive | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR2512599 | Other | lineage3 | gb | ERR4819546 | HR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4818952 | Other | lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR2513910 | Other | lineage3 | gb | SRR7131145 | Other | lineage4.1.2.1 | None | ERR4820193 | Other | lineage3 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR2024954 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR7131195 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4769555 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None |
|---|
