Rv1630 - c.816T>C
Drug resistance types
82 Sensitive
53 RR-TB
47 HR-TB
33 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 2 |
| 25 | |
| lineage4.4.2;lineage2.2.1 | 1 |
| La1.8.1 | 5 |
| lineage2.2.1 | 31 |
| lineage4.4.2 | 2 |
| lineage4 | 33 |
| lineage4.3.4.2.1 | 3 |
| lineage4.9 | 115 |
| La1.7.X-unk4 | 1 |
| La1.3 | 4 |
| lineage6.1.1 | 2 |
| lineage3 | 21 |
| lineage3.1.2 | 1 |
| lineage4.8 | 12 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1 | 13 |
| lineage5.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage6 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.3.3 | 2 |
| La2 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1 | 1 |
| lineage3.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.5;lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 317 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502943 | HR-TB | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1063857 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769495 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR5908124 | Other | lineage4.8 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR9119120 | Other | lineage4.8 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10033118 | HR-TB | lineage4 | None | ERR9787336 | Other | lineage6 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13837432 | Other | lineage4.9 | None | SRR13837504 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156832 | RR-TB | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911554 | Other | lineage4.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675229 | Other | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR2027290 | RR-TB | lineage3.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675509 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2229123 | Sensitive | lineage4.8 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4817131 | Pre-XDR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816656 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2512986 | Other | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818929 | HR-TB | None | ERR4818561 | HR-TB | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | SRR5341396 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819910 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR1023509 | Other | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR2517475 | Other | lineage4 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | SRR6044841 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6896545 | Other | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None |
|---|
