Rv1630 - c.816T>C


Drug resistance types
78 Sensitive 42 RR-TB 39 HR-TB 30 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 70 Other
lineage Counts
lineage Count
lineage4.9 109
lineage4.1.2.1 5
lineage4.3.4.2.1 5
lineage4.2.1 4
lineage2.1;lineage4.9;lineage6.3 1
lineage4.8 20
lineage1.1.1 1
lineage2.2.1 27
lineage4.5 1
lineage6.1.1 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.2 3
lineage3 14
lineage4.3.3 6
lineage4 6
lineage6.1.3 1
lineage3.1.2.1 3
lineage2.2.1.1 1
lineage4.1.1.3 3
La2;lineage4.9 1
La1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.9 2
1
lineage1.1.1;lineage4 1
lineage4.3.2.1 2
lineage4.6.1.2 3
lineage4.1.1.3;lineage4.9 2
La1.8.1 1
lineage1;lineage4.9 1
La1.6 1
lineage4.4.1.1 3
La1.2.BCG 3
lineage2.2.1;lineage4 1
lineage4.2.2.2 1
lineage2.2;lineage4 1
lineage2.2;lineage4.9 1
lineage4.1;lineage4.9 1
lineage3;lineage4 2
lineage4.3.4.2 1
lineage3.1.2.2 1
lineage2.2.1;lineage4.5 1
lineage3.1.2.1;lineage4.9 1
lineage4.3.1 1
lineage2;lineage4 1
lineage3;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.8.1 1
lineage1.1.3.2 1
lineage5.1.1 1
lineage4.1.1.1 2
lineage4.1.2 1
La1.2;La1.8.1 1
La2 1
lineage4.9;lineage9 1
lineage4.4.2 1
La1.2.BCG;lineage4.9 1
lineage4.4.1.1.1 1
La1.7.X-unk4 1
lineage4.1.2;lineage4.9 1
lineage5.1.4 1
lineage3.1.3 1
spoligotype Counts
spoligotype Count
None 270
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675477 Sensitive lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR978751 Other lineage4.8 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR9787014 Other lineage6.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR7070223 HR-TB lineage3 None
SRR12708409 HR-TB lineage4.3.3 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
ERR4815079 RR-TB lineage3 None
ERR3275450 Other lineage4 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
ERR473323 HR-TB lineage4.9 None
ERR4816476 Other lineage3.1.2.1 None
SRR3675522 Other lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4820773 HR-TB lineage4.9 None
SRR3675552 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR18909918 Other lineage2.2.1.1 None
ERR5908124 Other lineage4.8 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR3675473 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR2512606 HR-TB lineage3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR2446382 Other lineage4 None
ERR926163 Other lineage4.9 None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR6358951 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR3675229 Sensitive lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR9971168 Other lineage4.3.2.1 None
ERR736831 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4769442 Sensitive lineage4.9 None
ERR2517475 Other lineage4 None
SRR1173281 Other lineage3 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
ERR11252736 Other lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
ERR978765 RR-TB lineage4.8 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR502481 RR-TB lineage4.9 None
ERR502474 RR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
ERR4829816 RR-TB lineage4.4.1.1 None
SRR1915479 Other La1.2.BCG None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4820266 Sensitive lineage3 None
ERR978752 Other lineage4.8 None
ERR926162 Sensitive lineage4.9 None
ERR867575 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR12708418 HR-TB lineage2.2.1 None
SRR1049672 Other lineage3 None
SRR3675279 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR3675230 Other lineage3;lineage4 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1175508 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR3283021 HR-TB lineage4.9 None
SRR6046376 Other lineage3 None
SRR6046564 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR978767 RR-TB lineage4.8 None
ERR4829039 RR-TB lineage4.3.1 None
SRR3675541 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR3797062 RR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR5341437 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4819383 RR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1180413 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR5341396 Other lineage3;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4815815 Sensitive lineage4.9 None
SRR1062918 Other lineage3 None
ERR4819863 RR-TB lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR1735598 RR-TB lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR9786076 Sensitive lineage3 None
SRR1180355 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR7070195 Sensitive lineage3.1.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR751345 Other lineage5.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR12708384 Sensitive lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR11342682 Other lineage4.1.2 None
ERR6359066 HR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR3675577 Sensitive lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
SRR7240033 Other La1.2;La1.8.1 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR502473 RR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR20969542 Other lineage4.4.2 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR926159 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR4812155 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9119120 Other lineage4.8 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR3675247 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
SRR29096150 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR14801652 HR-TB lineage4.3.3 None
SRR6044819 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978735 Other lineage4.8 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR3675472 Sensitive lineage4.9 None
SRR6982246 Sensitive lineage4.1.2;lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR867573 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4797313 Sensitive lineage2.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR16156804 Sensitive lineage4.9 None