Rv1630 - c.813G>C
Drug resistance types
17 Sensitive
56 RR-TB
27 HR-TB
23 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage4 | 16 |
| lineage4.9 | 62 |
| 9 | |
| La1.7.X-unk4 | 1 |
| lineage4.1.2.1 | 11 |
| lineage3 | 23 |
| La1.3 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.8 | 12 |
| lineage5.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage6 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1 | 17 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| La2 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage3.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4;lineage2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.1.1 | 1 |
| La3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 211 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3439489 | RR-TB | La1.8.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR5908124 | Other | lineage4.8 | None | ERR6359069 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9787336 | Other | lineage6 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424765 | MDR-TB | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814841 | Other | lineage4.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816232 | Other | lineage4 | None | ERR4817464 | Other | lineage3.1.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4817131 | Pre-XDR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2512986 | Other | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2515055 | Other | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818556 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820266 | RR-TB | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341456 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR1023509 | Other | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4820030 | Other | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046131 | Sensitive | La3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045015 | Sensitive | La3 | gb | SRR6046376 | Other | lineage3 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046695 | Sensitive | La3 | gb | SRR6046737 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR185024 | Other | lineage2.2.2 | None |
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