Rv1630 - c.813G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
27 Sensitive
41 RR-TB
20 HR-TB
18 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.9 | 51 |
| lineage2.2.1 | 12 |
| lineage4.2.1 | 2 |
| lineage3 | 15 |
| La1.8.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.8 | 21 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| 1 | |
| La3 | 5 |
| lineage4.1.2.1 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage6 | 1 |
| La1.6 | 1 |
| lineage3;lineage4 | 1 |
| lineage3.1.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.3 | 1 |
| La2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR978735 | Other | lineage4.8 | None | ERR867573 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR29772570 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4798823 | HR-TB | None | ERR502481 | RR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR6046131 | Sensitive | La3 | None | SRR1049672 | Other | lineage3 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR13289696 | Sensitive | La3 | None | ERR323037 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | SRR10993951 | RR-TB | La1.6 | None | SRR6046376 | Other | lineage3 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341456 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6045015 | Sensitive | La3 | gb | SRR6046695 | Sensitive | La3 | gb | SRR1140736 | Other | lineage4.1.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR978751 | Other | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR13289541 | Sensitive | La3 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR9119120 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2512606 | HR-TB | lineage3 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR13888750 | Other | La2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7070223 | HR-TB | lineage3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4820266 | Sensitive | lineage3 | None | ERR978752 | Other | lineage4.8 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR5908124 | Other | lineage4.8 | None | ERR751345 | Other | lineage5.1.1 | None |
|---|
