Rv0668 - c.-237G>C
Drug resistance types
28 Sensitive
21 RR-TB
73 HR-TB
20 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 20 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.9 | 109 |
| La3;lineage4.9 | 7 |
| lineage6.1.3 | 1 |
| lineage4 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.3;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.8 | 6 |
| lineage2.2.1.1 | 5 |
| lineage1.1.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La3;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| 2 | |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.2.2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.2.1 | 2 |
| lineage3 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.3.4.1 | 2 |
| La1.2.BCG | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.3 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1.1.2 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| La2;lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR4821747 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR6046593 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR1175474 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4819305 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4769452 | Other | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR14782054 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR926164 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4816866 | Other | lineage2.2.1 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4819307 | Other | lineage4.3.2 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR7535082 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1159378 | Other | lineage4.9 | None |
|---|
