lineage | Count |
---|---|
La1.8.1 | 3 |
lineage4.9;La1.3 | 1 |
lineage4.9 | 9 |
lineage4.5;lineage2.2.1 | 1 |
La1.3 | 1 |
lineage2.2.1 | 7 |
lineage4.1.1.3 | 1 |
lineage4.3.2.1 | 1 |
2 | |
lineage4.2.1 | 1 |
lineage3 | 3 |
lineage4.4.1.1 | 1 |
lineage1.1.3.1 | 1 |
lineage4.5 | 1 |
lineage3.1.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 36 |
ID | Drug resistance | Lineage | Country iso2 | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR3797068 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4769495 | Other | La1.3 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1173310 | MDR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | ERR4815313 | Sensitive | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR2229791 | RR-TB | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6896545 | Other | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR3283006 | RR-TB | lineage4.9 | None |
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