Rv3596c - c.771G>C
Drug resistance types
127 Sensitive
26 RR-TB
80 HR-TB
30 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 39 |
| lineage4.1.2.1 | 7 |
| 69 | |
| lineage4 | 74 |
| lineage4.9 | 109 |
| lineage4.5 | 2 |
| lineage4.3.3 | 2 |
| lineage6 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.6.1.2 | 5 |
| lineage4.8 | 3 |
| La1.8.1 | 4 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage3 | 7 |
| lineage4.4 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.3 | 1 |
| lineage4.4.1.1 | 2 |
| La1.7.1 | 1 |
| lineage4.1 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.2.1 | 3 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.1 | 2 |
| lineage6.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 3 |
| lineage4.9;La1.3 | 2 |
| La1.2 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 375 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6197036 | Other | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR736835 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9787336 | Other | lineage6 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR17658565 | Other | lineage3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13837520 | Sensitive | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1791747 | Other | La1.8.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675234 | Other | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | SRR3675456 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817998 | Other | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR552022 | HR-TB | lineage6.3.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR4821345 | Sensitive | lineage2.2.1 | gb | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045086 | Other | lineage3 | None | SRR6045233 | HR-TB | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046362 | HR-TB | None | SRR6046492 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR4831888 | HR-TB | lineage1.1.1.1 | vn | ERR502943 | HR-TB | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR8217918 | HR-TB | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323107 | Other | lineage4 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | ERR1034634 | HR-TB | None | ERR3283024 | Other | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797061 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR387051 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4769514 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None |
|---|
