Rv3596c - c.771G>C


Drug resistance types
95 Sensitive 23 RR-TB 54 HR-TB 36 MDR-TB 13 Pre-XDR-TB 1 XDR-TB 109 Other
lineage Counts
lineage Count
La1;lineage4.9 1
lineage4.9 155
lineage2.2.1 32
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.4.1 1
lineage4.4.1.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.6.1.2 4
La2;lineage2.2 1
lineage4 4
lineage2.2.1;lineage4 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.8.1 3
La3;lineage4.9 9
lineage4.8 5
lineage2.2.1.2 1
lineage3 7
lineage4.9;lineage7 4
lineage3.1.3 1
lineage2.2;lineage4 1
La2;lineage4.9 1
lineage4.3.2.1 4
lineage2.1;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.3.3;lineage4.8 3
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4.1.1.3 3
lineage4.1.2.1 7
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage3.1.2 2
M.canetti;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage1.1.1 2
lineage2.2.1;lineage4.9 2
lineage4.1;lineage4.9 2
lineage2.2.1.1 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.3;lineage4.9 2
1
lineage4.1.1.1 2
lineage2.1;lineage4.9;lineage7 1
lineage6.1.3 1
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.2.1 2
La1.7;M.canetti;lineage4.9 3
lineage4.3.4.2.1 2
lineage4.9;lineage6.3 1
lineage2;lineage4.9 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage4.3.3 4
lineage4.2;lineage4.9 1
lineage2.2.2 3
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.4 1
lineage1;lineage4.9 1
lineage4.5 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.2.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
lineage4.4.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2;lineage4 1
lineage1.1.1;lineage4 1
lineage5.1.4 1
La3;lineage4 1
spoligotype Counts
spoligotype Count
None 331
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769497 Other La1;lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR5341330 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR369157 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675292 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4821345 Other lineage2.2.1 gb
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR363474 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR12142339 HR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR369163 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR349264 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180250 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172885 HR-TB lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR12708384 Sensitive lineage4.9 None
SRR26112690 Other lineage3.1.2 None
SRR3675387 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR363490 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3797062 RR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR4178226 Sensitive lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR363500 Other lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1034634 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR349266 Other lineage4.9 None
SRR28351444 MDR-TB lineage3 None
SRR12708416 Sensitive None
SRR22424765 HR-TB lineage4.8 None
SRR1180406 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6044952 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR363449 Other lineage4.9 None
ERR4817998 Other lineage3 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4769493 Other lineage4.9 None
ERR363421 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR369151 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR1140724 Other lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR26112429 Other lineage3.1.2 None
ERR4819314 HR-TB lineage1.1.1 None
ERR387051 RR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR5341345 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR16156188 Sensitive lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR6045371 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR867541 MDR-TB lineage4.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR3675541 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1175512 Sensitive lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708419 Other lineage4.3.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR3675209 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18002974 Other lineage2.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR3283031 Other La3;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046245 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR373946 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR3283032 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR867570 RR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1183054 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR323107 HR-TB lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4769450 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR473323 HR-TB lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR3283021 MDR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
ERR369159 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR363446 Other lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR6045795 Other lineage2.2.1 None
ERR349300 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None