Rv3596c - c.771G>C


Drug resistance types
95 Sensitive 23 RR-TB 54 HR-TB 36 MDR-TB 13 Pre-XDR-TB 1 XDR-TB 109 Other
lineage Counts
lineage Count
lineage4.9 155
lineage2.2.1 32
lineage4.3.4.2.1 2
lineage4.3.3;lineage4.8 3
M.canetti;lineage1 1
lineage4.1.2.1 7
lineage3 7
La3;lineage4.9 9
lineage4.9;lineage6.3 1
lineage2.2 1
La1.7;M.canetti;lineage4.9 3
lineage4.1.1.3 3
lineage2;lineage4.9 1
lineage4.3.2.1 4
M.canetti;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage1.1.1 2
lineage2.2.1;lineage4.9 2
lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 2
lineage4.1.1.1 2
lineage4.6.1.2 4
lineage4.3.3 4
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2;lineage4 1
lineage2.2.2 3
La3;lineage4 1
1
lineage4.5 2
lineage4.1.1.3;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
lineage4.4.1.1.1 1
La1.8.1 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.8 5
La2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4 4
lineage1;lineage4.9 1
lineage1.2.2.2 1
lineage4.2.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage3.1.2 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage2.2.1.1 4
lineage4.9;lineage7 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1;lineage4 1
lineage4.3.4.1 1
lineage6.1.3 1
La2;lineage2.2 1
lineage2.2.1;lineage4 2
lineage2.2.1.2 1
lineage3.1.3 1
lineage2.2;lineage4 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4.4.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage5.1.4 1
La1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;lineage4.9 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
spoligotype Counts
spoligotype Count
None 331
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR3283032 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
ERR867570 RR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR6045706 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3797047 MDR-TB lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR369159 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR363446 Other lineage4.9 None
SRR12708416 Sensitive None
ERR752229 Other lineage4.5 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4769493 Other lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR400320 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
SRR18002974 Other lineage2.2.1 None
ERR3797065 RR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR4821345 Other lineage2.2.1 gb
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1791747 Other La1.8.1 None
ERR363474 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR349330 Sensitive lineage4.9 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR349264 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172885 HR-TB lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR26112690 Other lineage3.1.2 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR4813263 MDR-TB lineage4.8 None
SRR1181091 Other lineage2.2.1.1 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR363447 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR363500 Other lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR12708419 Other lineage4.3.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR28351444 MDR-TB lineage3 None
SRR6045795 Other lineage2.2.1 None
SRR6044952 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR3797079 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045555 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR5341345 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR6865502 Sensitive lineage4 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR3797063 Other La3;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR363498 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR5431730 Other La1.8.1 None
SRR1183054 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1175513 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR473323 HR-TB lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR6359082 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
SRR22424765 HR-TB lineage4.8 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR363449 Other lineage4.9 None
ERR4817998 Other lineage3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR5341330 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4596902 MDR-TB lineage3 None
SRR26112429 Other lineage3.1.2 None
SRR3675473 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None