EBG00000313325 - n.841G>T


Drug resistance types
23 Sensitive 36 RR-TB 9 HR-TB 24 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 92 Other
lineage Counts
lineage Count
lineage4.9 28
lineage4.1.2.1 16
lineage4.3.2.1 2
lineage2.2.1 28
6
lineage3 28
lineage4.4.1.1.1 2
lineage4.8 4
lineage4.4.2 3
lineage4.3.3 3
lineage4.2.1 5
lineage4.4.1.1 7
lineage4.1.1.3 2
lineage6 2
lineage4.4.1.2 1
lineage4.1.3 2
lineage4.1.2 6
lineage4.1 1
lineage3.1 1
lineage1.2.1.1 2
lineage3.1.1 3
lineage3.1.2.1 2
lineage4.7 3
lineage4.2.2.2 2
lineage4.6.2.2 3
lineage4.1.1 3
lineage1.1.2 4
lineage4 6
lineage4.3.4.2 2
lineage3.1.3 1
lineage4.3.4.1 1
La3 1
lineage1.2.2.2 1
lineage2.1 1
lineage4.3.1 1
lineage4.2.1.1 1
La1.8.1 4
lineage1.2.2.1 1
lineage4.2.2 1
lineage4.3.2 1
lineage2.2.1.1 2
spoligotype Counts
spoligotype Count
None 193
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184329 MDR-TB lineage4.9 None
SRR11342690 Sensitive lineage4.1.2.1 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1173310 MDR-TB None
SRR1173719 HR-TB lineage3 None
SRR11349154 MDR-TB lineage4.4.1.1.1 None
SRR11349180 MDR-TB lineage2.2.1 None
SRR1173185 HR-TB lineage4.9 None
SRR14801720 RR-TB lineage4.8 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR1196478 MDR-TB lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156832 RR-TB None
SRR15316595 RR-TB lineage4.4.2 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR19304029 Other lineage4.8 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR19303985 Other lineage4.8 None
SRR18002899 RR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19304094 Other lineage6 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR22048536 Other lineage4.3.3 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4815394 RR-TB lineage4.2.1 None
ERR4814496 RR-TB lineage4.1.2 None
ERR4814554 Other lineage4.1 None
ERR4815704 Other lineage4.1.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675219 Other lineage4.9 None
SRR3675230 RR-TB lineage3 None
ERR2027290 RR-TB lineage3.1 None
SRR3675261 Other lineage1.2.1.1 None
ERR4815738 Other lineage3 None
ERR4815079 RR-TB lineage3 None
ERR4817464 Other lineage3.1.1 None
ERR4817349 Other lineage4.9 None
ERR4815061 Sensitive lineage3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4817131 Pre-XDR-TB None
ERR2027304 Sensitive lineage4.1.2.1 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816462 Other lineage4.1.2.1 None
ERR4816476 Other lineage3.1.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR4816604 RR-TB lineage4.1.2 None
ERR4816628 Other lineage3 None
ERR4817189 Other lineage4.7 None
ERR4817803 Other lineage4.2.2.2 None
SRR5818426 Other None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4817276 Other lineage2.2.1 None
ERR4817915 RR-TB lineage4.9 None
ERR2512986 Other lineage3 None
ERR4818050 Other lineage4.6.2.2 None
ERR2513401 HR-TB lineage3 None
ERR4818265 Other lineage4.1.2.1 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818259 RR-TB lineage4.1.1 None
ERR4818556 Other lineage3 None
ERR4818370 Other lineage4.1.1 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR2509886 RR-TB lineage3 None
ERR2513682 Sensitive lineage3 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR2513681 Other lineage1.1.2 None
ERR2513743 Other lineage4.1.2 None
ERR4820324 Other lineage4 None
ERR2513830 RR-TB lineage4.8 None
ERR4820266 RR-TB lineage3 None
ERR4819515 HR-TB lineage4.2.1 None
ERR4820746 RR-TB lineage3 None
ERR4819528 RR-TB lineage3 None
ERR2514261 Other lineage3 None
ERR4820777 Other lineage4.1.2.1 None
ERR4820397 Other lineage4.9 None
ERR2514394 Other lineage4.3.4.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR2514515 Other lineage4.2.1 None
ERR4820478 Other lineage3.1.3 None
ERR2514692 Other None
ERR2514645 Other lineage4.3.4.1 None
ERR4819842 Other lineage4.1.2.1 None
ERR2514854 Other lineage4.3.3 None
ERR2514834 Other lineage4.7 None
ERR2515007 Other lineage3 None
ERR4819980 Other lineage4.1.2.1 None
ERR4820130 Other lineage3 None
ERR4820026 Other lineage3 None
ERR4820075 Other lineage4.1.2.1 None
ERR2515032 Other lineage3 None
ERR4821789 Sensitive lineage1.1.2 None
ERR4820194 Other La3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4822034 Other lineage3.1.2.1 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR4821492 HR-TB lineage3 None
ERR4821408 Sensitive lineage4.1.2 None
ERR4821488 Sensitive lineage4.1.3 None
ERR4821550 Other lineage2.2.1 None
SRR5818395 Sensitive lineage4.9 None
SRR5818394 Other lineage4.9 None
ERR4821572 Other lineage2.1 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045591 Other lineage4.1.2.1 None
SRR5818408 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR6045705 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR6045743 Other lineage3 None
SRR6044904 Other lineage3 None
SRR6044784 MDR-TB lineage3 None
SRR6044936 Other lineage4 None
SRR6045335 Other lineage4.1.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045125 Other lineage1.1.2 None
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
ERR2851359 Other lineage4.9 None
SRR6045424 Other lineage1.1.2 None
SRR6046246 Other lineage3 None
ERR4829039 RR-TB lineage4.3.1 None
ERR4829336 Other lineage4 None
SRR6046521 Other lineage4.4.1.1 None
ERR4829816 RR-TB lineage4.4.1.1 None
ERR502470 RR-TB lineage4.9 None
SRR6046729 Other None
SRR6046815 Other lineage3 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6785281 Other lineage4.2.1.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR6896545 Other lineage4.9 None
ERR5087596 Other La1.8.1 None
SRR6982530 Other lineage1.2.2.1 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR9971068 MDR-TB lineage4.4.1.1.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796554 Sensitive lineage4.1.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796558 Sensitive lineage4 None
ERR10796575 RR-TB lineage4.9 None
ERR10796583 Other lineage2.2.1 None
ERR10796599 Other lineage4 None
ERR10796586 Other lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796623 Other lineage4.1.1 None
ERR3283006 RR-TB lineage4.9 None
ERR3797068 Other La1.8.1 None
ERR3439489 RR-TB La1.8.1 None
ERR3797067 Other La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR9117676 Other lineage4.2.2.2 None
ERR3806588 Other lineage6 None
ERR4187652 Other lineage4.9 None
SRR10315579 Other lineage2.2.1.1 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR9117788 Other lineage3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None