EBG00000313325 - n.841G>T
Drug resistance types
14 Sensitive
15 RR-TB
6 HR-TB
15 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 5 |
| lineage4.9 | 19 |
| lineage4.3.2 | 1 |
| lineage4.4.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 3 |
| lineage3;lineage4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1 | 22 |
| lineage4.3.3 | 1 |
| lineage3 | 7 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2 | 2 |
| lineage1.2.1.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.6 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.8 | 3 |
| La1.8.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage3.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5818394 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR867575 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR5163959 | Other | lineage4.9 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR5818426 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5818464 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818507 | Other | lineage4.1.2.1 | None | SRR7070665 | HR-TB | lineage3 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | DRR188816 | Other | lineage4.2.2 | None | ERR2851359 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR5818437 | RR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR6046729 | Other | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR5818400 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR5087596 | Other | La1.8.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | ERR867544 | Other | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR14801720 | Other | lineage4.8 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None |
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