EBG00000313325 - n.841G>T
Drug resistance types
35 Sensitive
38 RR-TB
13 HR-TB
28 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
128 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 7 |
| lineage4.1.3 | 2 |
| lineage4.2.1 | 8 |
| lineage4.1 | 1 |
| lineage2.2.1 | 32 |
| lineage3 | 45 |
| lineage4.1.2.1 | 21 |
| lineage4.9 | 30 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 2 |
| lineage3.1.1 | 4 |
| lineage3.1 | 1 |
| lineage3.1.2.1 | 5 |
| 6 | |
| lineage4.6.2.2 | 6 |
| lineage4.7 | 3 |
| lineage4.8 | 11 |
| lineage1.1.2 | 5 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1 | 4 |
| lineage3.1.3 | 2 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 7 |
| lineage4 | 6 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.6.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.3 | 3 |
| lineage1.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| La3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.3.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| La1.8.1 | 4 |
| lineage1.2.2.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage6 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 252 |
Geographic prevalence
Country level data for this variant is available for 61 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814554 | Other | lineage4.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815704 | Other | lineage4.1.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675219 | Other | lineage4.9 | None | SRR3675454 | Other | lineage3 | gb | SRR3675291 | Sensitive | lineage4.6 | gb | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4815738 | Other | lineage3 | None | SRR3675289 | MDR-TB | lineage2.2.1 | gb | ERR4815079 | RR-TB | lineage3 | None | ERR4815061 | Sensitive | lineage3 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4817349 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR2027304 | Sensitive | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4817382 | Other | lineage4.9 | gb | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816628 | Other | lineage3 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816726 | Sensitive | lineage1.1.2 | gb | ERR4817276 | Other | lineage2.2.1 | None | SRR5818426 | Other | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4817306 | Other | lineage3 | gb | ERR4818671 | Other | lineage4.8 | gb | ERR4817907 | Other | lineage3 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR2512986 | Other | lineage3 | None | ERR2513398 | Other | lineage4.2.1 | gb | ERR4817941 | Other | lineage4.8 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4818753 | Other | lineage3 | gb | ERR4818000 | Other | lineage3.1.1 | gb | ERR4818104 | Other | lineage4.1.2 | gb | ERR4818763 | Other | lineage3 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2513160 | Pre-XDR-TB | lineage3 | gb | ERR2512443 | Other | lineage4.8 | gb | ERR2513179 | Sensitive | lineage4.6.2.2 | gb | ERR4818151 | Other | lineage2.2.1 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR4818370 | Other | lineage4.1.1 | None | ERR4818530 | Other | lineage2.2.1 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818556 | Other | lineage3 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR2513508 | Sensitive | lineage3 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR2513682 | Sensitive | lineage3 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4820324 | Other | lineage4 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4820328 | Other | lineage3 | gb | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820746 | RR-TB | lineage3 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514261 | Other | lineage3 | None | ERR4820397 | Other | lineage4.9 | None | ERR2514295 | HR-TB | lineage3 | gb | ERR4819522 | Other | lineage4.2.1 | gb | ERR2514279 | Other | lineage3 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR4819613 | Sensitive | lineage4.3.1.1 | gb | ERR2514394 | Other | lineage4.3.4.2 | None | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514540 | Other | lineage3 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514515 | Other | lineage4.2.1 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR4820478 | Other | lineage3.1.3 | None | ERR2514803 | Sensitive | lineage4.6.2 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514692 | Other | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR2514630 | Other | lineage3.1.2.1 | gb | ERR2514834 | Other | lineage4.7 | None | ERR2514854 | Other | lineage4.3.3 | None | ERR4820026 | Other | lineage3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819980 | Other | lineage4.1.2.1 | None | ERR2515007 | Other | lineage3 | None | ERR2515032 | Other | lineage3 | None | ERR4820652 | Other | lineage1.1.1 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | ERR4820690 | Other | lineage4.1.1 | gb | ERR4821789 | Sensitive | lineage1.1.2 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4820194 | Other | La3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR4822034 | Other | lineage3.1.2.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4822150 | Other | lineage4.8 | gb | ERR4821492 | HR-TB | lineage3 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818394 | Other | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821572 | Other | lineage2.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045288 | Other | lineage3 | gb | SRR6045335 | Other | lineage4.1.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | ERR4829336 | Other | lineage4 | None | ERR4830525 | MDR-TB | lineage4.4.1.1.1 | za | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046729 | Other | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6046815 | Other | lineage3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6896545 | Other | lineage4.9 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | ERR5087596 | Other | La1.8.1 | None | SRR6982530 | Other | lineage1.2.2.1 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796554 | Sensitive | lineage4.1.2 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796599 | Other | lineage4 | None | ERR9117788 | Other | lineage3 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3797068 | Other | La1.8.1 | None | ERR3806588 | Other | lineage6 | None | ERR4798683 | Sensitive | lineage3 | in | ERR9117676 | Other | lineage4.2.2.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR11342690 | Sensitive | lineage4.1.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11349154 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16156832 | RR-TB | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304029 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None |
|---|
