ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR10177262
|
Sensitive
|
M.canetti
|
None
|
ERR1043163
|
Other
|
La3;M.canetti
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR234659
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR3597003
|
Sensitive
|
M.canetti
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR22179528
|
Sensitive
|
M.canetti
|
None
|
ERR313114
|
Sensitive
|
M.canetti
|
None
|
ERR4811101
|
Other
|
lineage4.4.2
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1173363
|
Other
|
|
None
|
ERR266121
|
Sensitive
|
M.canetti
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR24061599
|
Sensitive
|
M.canetti
|
None
|
SRR24061600
|
Sensitive
|
M.canetti
|
None
|
ERR266122
|
Sensitive
|
La3;M.canetti
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR551179
|
Sensitive
|
M.canetti
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3597001
|
Sensitive
|
M.canetti
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR3597004
|
Sensitive
|
M.canetti
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR10522763
|
Sensitive
|
M.canetti
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR551056
|
Sensitive
|
M.canetti
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR266110
|
Other
|
M.canetti
|
None
|
ERR266108
|
Sensitive
|
M.canetti
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR1336825
|
Sensitive
|
La3;M.canetti
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
ERR3597006
|
Other
|
La3;M.canetti
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR551057
|
Other
|
M.canetti
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR29056248
|
Sensitive
|
M.canetti
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR28119753
|
Other
|
lineage4.9
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR29093909
|
Other
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
SRR18289196
|
Sensitive
|
M.canetti
|
None
|
ERR266120
|
Sensitive
|
M.canetti
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR551181
|
Sensitive
|
M.canetti
|
None
|
SRR16058674
|
Other
|
M.canetti
|
None
|
ERR349298
|
Sensitive
|
lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR1336820
|
Sensitive
|
La3;M.canetti
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR2660539
|
Other
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
SRR24061598
|
Sensitive
|
M.canetti
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
ERR1336826
|
Sensitive
|
La3;M.canetti
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR551180
|
Sensitive
|
M.canetti
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR1172857
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
ERR1336823
|
Sensitive
|
La3;M.canetti
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR5818668
|
Sensitive
|
M.canetti
|
dj
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR3597005
|
Sensitive
|
M.canetti
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR266126
|
Sensitive
|
La2;M.canetti
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR1336822
|
Sensitive
|
M.canetti
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR16058668
|
Sensitive
|
M.canetti
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR266107
|
Other
|
M.canetti
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR9896144
|
Other
|
lineage3
|
None
|
SRR10177261
|
Sensitive
|
M.canetti
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR3675279
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
SRR10177259
|
Other
|
M.canetti
|
None
|
SRR10522783
|
Sensitive
|
M.canetti
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR3597002
|
Other
|
M.canetti
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR363437
|
Sensitive
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR21469201
|
Other
|
La1.7.1
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR9125480
|
Sensitive
|
M.canetti
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR18289195
|
Sensitive
|
M.canetti
|
None
|
SRR5818652
|
Sensitive
|
M.canetti
|
dj
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR212138
|
HR-TB
|
lineage4.9
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR266109
|
Sensitive
|
M.canetti
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR10177263
|
Sensitive
|
M.canetti
|
None
|
SRR10177258
|
Other
|
M.canetti
|
None
|
SRR5818661
|
Other
|
M.canetti
|
dj
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR552305
|
Sensitive
|
M.canetti
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7451301
|
Sensitive
|
M.canetti
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR10177260
|
Other
|
M.canetti
|
None
|
ERR266124
|
Other
|
M.canetti
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR1043164
|
Other
|
La3;M.canetti
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR28170812
|
Sensitive
|
M.canetti
|
None
|
SRR5818605
|
Other
|
M.canetti
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
SRR29097037
|
Other
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4817181
|
Sensitive
|
M.canetti
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR24061597
|
Sensitive
|
M.canetti
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4818615
|
Sensitive
|
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR313116
|
Sensitive
|
M.canetti
|
None
|
ERR4819927
|
Sensitive
|
M.canetti
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4821046
|
Sensitive
|
M.canetti
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
ERR552304
|
Sensitive
|
M.canetti
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR1175074
|
Other
|
|
None
|
SRR5818567
|
Other
|
M.canetti
|
dj
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
ERR551055
|
Sensitive
|
M.canetti
|
None
|
SRR5818614
|
Sensitive
|
M.canetti
|
dj
|
ERR4816717
|
RR-TB
|
lineage3.1.2.1
|
None
|
ERR4815361
|
Other
|
M.canetti
|
None
|
SRR6650709
|
Sensitive
|
M.canetti
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR1336824
|
Sensitive
|
La3;M.canetti
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR313113
|
Other
|
M.canetti
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR552307
|
Sensitive
|
M.canetti
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR212123
|
Other
|
lineage4.9
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR313115
|
Other
|
M.canetti
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR266106
|
Sensitive
|
M.canetti
|
None
|
ERR313117
|
Other
|
M.canetti
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046802
|
Other
|
lineage4.9
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
SRR5818653
|
Sensitive
|
M.canetti
|
dj
|
ERR3597007
|
Sensitive
|
M.canetti
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR9125475
|
Other
|
M.canetti
|
None
|
ERR4816019
|
Sensitive
|
M.canetti
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR1336821
|
Sensitive
|
La3;M.canetti
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR551182
|
Sensitive
|
M.canetti
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
ERR552306
|
Sensitive
|
M.canetti;lineage4.9
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
ERR11465333
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|