TB-Profiler result

Run: ERR3597006

Summary

Run ID: ERR3597006

Sample name:

Date: 01-04-2023 02:38:05

Number of reads: 3855101

Percentage reads mapped: 97.27

Strain:

Drug-resistance: Sensitive


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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5207 c.-33A>C upstream_gene_variant 1.0
gyrB 5440 c.201A>G synonymous_variant 1.0
gyrB 5452 c.213G>A synonymous_variant 1.0
gyrB 5770 c.531C>T synonymous_variant 1.0
gyrB 6001 c.762G>A synonymous_variant 1.0
gyrB 6004 c.765T>C synonymous_variant 1.0
gyrB 6286 c.1047T>C synonymous_variant 0.99
gyrA 6433 c.-869C>T upstream_gene_variant 1.0
gyrA 6436 c.-866C>T upstream_gene_variant 1.0
gyrA 7256 c.-46C>T upstream_gene_variant 1.0
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7523 c.222C>G synonymous_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 8288 c.987T>C synonymous_variant 1.0
gyrA 8654 c.1353C>T synonymous_variant 1.0
gyrA 9074 c.1773G>A synonymous_variant 1.0
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9218 c.1917C>T synonymous_variant 1.0
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9377 c.2076A>G synonymous_variant 1.0
gyrA 9716 c.2415T>C synonymous_variant 1.0
gyrA 9740 c.2439G>A synonymous_variant 1.0
gyrA 9776 c.2475T>C synonymous_variant 1.0
fgd1 490666 c.-117G>T upstream_gene_variant 0.97
fgd1 490679 c.-105_-104insG upstream_gene_variant 1.0
fgd1 490687 c.-96T>C upstream_gene_variant 1.0
fgd1 491406 p.Met208Ile missense_variant 1.0
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575665 c.318G>C synonymous_variant 1.0
mshA 575971 c.624C>T synonymous_variant 1.0
mshA 576285 p.Val313Ala missense_variant 1.0
mshA 576757 c.1410C>G synonymous_variant 1.0
ccsA 620256 c.366C>G synonymous_variant 1.0
ccsA 620257 p.Ile123Ala missense_variant 1.0
ccsA 620415 c.525T>C synonymous_variant 1.0
ccsA 620490 c.600A>C synonymous_variant 1.0
ccsA 620808 c.918T>C synonymous_variant 1.0
rpoB 759741 c.-66C>T upstream_gene_variant 1.0
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763660 c.291T>C synonymous_variant 1.0
rpoC 764152 c.783C>T synonymous_variant 1.0
rpoC 765478 c.2109T>C synonymous_variant 1.0
rpoC 766912 c.3543C>T synonymous_variant 1.0
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 0.99
mmpL5 778057 p.Ser142Gly missense_variant 1.0
mmpL5 778573 c.-93C>G upstream_gene_variant 1.0
mmpL5 779283 c.-803G>A upstream_gene_variant 0.99
mmpL5 779295 c.-815A>G upstream_gene_variant 1.0
mmpR5 779431 p.Asn148Gln missense_variant 1.0
mmpL5 779472 c.-992G>A upstream_gene_variant 1.0
mmpS5 779523 c.-618T>A upstream_gene_variant 1.0
mmpS5 779538 c.-633A>C upstream_gene_variant 1.0
mmpS5 779539 c.-634C>A upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781456 c.-104A>G upstream_gene_variant 1.0
fbiC 1302810 c.-121C>T upstream_gene_variant 1.0
fbiC 1302860 c.-71G>A upstream_gene_variant 1.0
fbiC 1302870 c.-61G>C upstream_gene_variant 1.0
fbiC 1302948 c.18T>C synonymous_variant 1.0
fbiC 1303288 p.Ser120Gly missense_variant 1.0
fbiC 1303747 p.Thr273Ala missense_variant 1.0
fbiC 1303860 c.930A>G synonymous_variant 1.0
fbiC 1304064 c.1134G>A synonymous_variant 1.0
fbiC 1304141 p.Ala404Gly missense_variant 1.0
fbiC 1304330 p.Ala467Asp missense_variant 1.0
fbiC 1304707 p.Val593Ile missense_variant 1.0
fbiC 1304907 c.1977C>A synonymous_variant 1.0
Rv1258c 1406466 p.Ser292Leu missense_variant 1.0
Rv1258c 1406492 p.Ile283Met missense_variant 1.0
Rv1258c 1407008 c.333C>A synonymous_variant 1.0
embR 1416462 p.Ala296Ser missense_variant 1.0
embR 1417294 c.54A>G synonymous_variant 1.0
embR 1417493 c.-146T>G upstream_gene_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471845 n.4dupT non_coding_transcript_exon_variant 1.0
rrl 1473420 n.-238A>T upstream_gene_variant 1.0
rrl 1474615 n.958A>C non_coding_transcript_exon_variant 0.99
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 1.0
inhA 1673499 c.-703T>C upstream_gene_variant 1.0
fabG1 1674079 p.Pro214Ala missense_variant 1.0
inhA 1674384 c.183C>T synonymous_variant 1.0
inhA 1674405 c.204G>A synonymous_variant 1.0
inhA 1674471 c.270G>C synonymous_variant 1.0
inhA 1674480 c.279T>C synonymous_variant 1.0
inhA 1674483 c.282G>C synonymous_variant 1.0
inhA 1674486 c.285T>C synonymous_variant 1.0
inhA 1674603 c.402G>A synonymous_variant 1.0
inhA 1674620 p.Pro140Gln missense_variant 1.0
inhA 1674780 c.579T>C synonymous_variant 1.0
rpsA 1833381 c.-161T>C upstream_gene_variant 1.0
rpsA 1833554 p.Thr5Ala missense_variant 1.0
rpsA 1833568 c.27G>C synonymous_variant 1.0
rpsA 1833596 c.55_56delAGinsTC synonymous_variant 1.0
rpsA 1833790 c.249T>C synonymous_variant 0.99
rpsA 1833907 c.366G>A synonymous_variant 1.0
rpsA 1834639 c.1098T>C synonymous_variant 0.99
rpsA 1834648 c.1107C>T synonymous_variant 1.0
rpsA 1834912 c.1371A>G synonymous_variant 1.0
tlyA 1917807 c.-133T>G upstream_gene_variant 1.0
tlyA 1917972 c.33A>G synonymous_variant 1.0
tlyA 1918149 c.210A>C synonymous_variant 1.0
tlyA 1918150 p.Val71Leu missense_variant 1.0
tlyA 1918242 c.303G>C synonymous_variant 1.0
tlyA 1918587 p.Gln216His missense_variant 1.0
tlyA 1918604 p.Ser222Thr missense_variant 1.0
ndh 2101777 c.1266C>G synonymous_variant 1.0
ndh 2101876 c.1167C>G synonymous_variant 1.0
ndh 2101990 c.1053G>T synonymous_variant 1.0
ndh 2102005 c.1038G>C synonymous_variant 1.0
ndh 2102164 c.879A>G synonymous_variant 1.0
ndh 2102302 c.741G>C synonymous_variant 1.0
ndh 2102366 p.Ala226Glu missense_variant 1.0
ndh 2102377 c.666A>G synonymous_variant 1.0
ndh 2102420 p.Lys208Arg missense_variant 1.0
ndh 2102443 c.600A>G synonymous_variant 1.0
ndh 2102482 c.561A>T synonymous_variant 1.0
ndh 2102638 c.405A>G synonymous_variant 1.0
ndh 2102644 c.399A>G synonymous_variant 1.0
ndh 2102680 c.363T>C synonymous_variant 1.0
ndh 2102791 c.252A>G synonymous_variant 1.0
ndh 2103028 p.Gln5His missense_variant 1.0
ndh 2103173 c.-132_-131insG upstream_gene_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2156055 c.57C>T synonymous_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2167934 c.2679G>A synonymous_variant 1.0
PPE35 2168269 p.Gly782Ser missense_variant 1.0
PPE35 2168342 c.2271T>C synonymous_variant 1.0
PPE35 2168567 c.2046A>G synonymous_variant 1.0
PPE35 2168612 c.2001C>T synonymous_variant 1.0
PPE35 2168882 c.1731T>C synonymous_variant 1.0
PPE35 2169263 c.1350C>T synonymous_variant 1.0
PPE35 2169304 p.Met437Leu missense_variant 0.98
PPE35 2169686 c.927T>C synonymous_variant 1.0
PPE35 2169717 p.Asn299Ile missense_variant 1.0
PPE35 2170178 c.435T>A synonymous_variant 1.0
PPE35 2170232 c.381T>C synonymous_variant 0.99
PPE35 2170394 c.219G>C synonymous_variant 1.0
PPE35 2170440 p.Gln58Arg missense_variant 1.0
PPE35 2170452 p.Gly54Asp missense_variant 1.0
PPE35 2170485 p.Val43Ala missense_variant 1.0
PPE35 2170499 c.114A>G synonymous_variant 1.0
PPE35 2170764 c.-152C>T upstream_gene_variant 1.0
Rv1979c 2221723 p.Arg481His missense_variant 1.0
Rv1979c 2222308 p.Asp286Gly missense_variant 1.0
Rv1979c 2222357 p.Thr270Ala missense_variant 1.0
Rv1979c 2222504 p.Met221Leu missense_variant 1.0
Rv1979c 2222598 c.567C>T synonymous_variant 1.0
Rv1979c 2222897 p.Ile90Val missense_variant 1.0
Rv1979c 2223146 p.Arg7Gly missense_variant 1.0
Rv1979c 2223255 c.-91A>G upstream_gene_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289104 c.138A>G synonymous_variant 1.0
pncA 2289700 c.-459T>C upstream_gene_variant 1.0
pncA 2289827 c.-586A>G upstream_gene_variant 1.0
kasA 2518132 c.18C>T synonymous_variant 1.0
kasA 2519287 c.1173T>C synonymous_variant 1.0
folC 2746174 c.1425A>C synonymous_variant 1.0
folC 2747204 p.Ala132Gln missense_variant 1.0
folC 2747572 c.27T>C synonymous_variant 1.0
folC 2747575 c.24G>C synonymous_variant 1.0
folC 2747628 c.-30G>C upstream_gene_variant 1.0
folC 2747631 c.-33C>G upstream_gene_variant 1.0
folC 2747691 c.-93A>G upstream_gene_variant 1.0
pepQ 2859490 p.Val310Ala missense_variant 1.0
pepQ 2860159 p.Ala87Gly missense_variant 0.19
ribD 2987614 c.766delA frameshift_variant 1.0
Rv2752c 3064627 p.Asn522Ser missense_variant 1.0
Rv2752c 3065573 p.Glu207Gln missense_variant 1.0
thyX 3067239 p.Ala236Asp missense_variant 1.0
thyX 3067355 c.591A>C synonymous_variant 1.0
thyX 3067439 c.507A>G synonymous_variant 1.0
thyX 3067980 c.-35T>C upstream_gene_variant 1.0
thyA 3074160 c.312A>G synonymous_variant 1.0
thyA 3074445 c.27C>T synonymous_variant 1.0
thyA 3074529 c.-58G>C upstream_gene_variant 1.0
thyA 3074580 c.-109T>C upstream_gene_variant 1.0
ald 3086623 c.-197A>G upstream_gene_variant 1.0
ald 3086661 c.-159G>A upstream_gene_variant 1.0
ald 3086671 c.-149T>C upstream_gene_variant 1.0
ald 3086707 c.-113G>C upstream_gene_variant 1.0
ald 3086733 c.-87G>A upstream_gene_variant 1.0
ald 3086737 c.-83T>C upstream_gene_variant 1.0
ald 3086744 c.-76A>T upstream_gene_variant 1.0
ald 3086753 c.-67A>G upstream_gene_variant 1.0
ald 3086760 c.-60A>T upstream_gene_variant 1.0
ald 3086771 c.-49T>C upstream_gene_variant 1.0
ald 3086773 c.-47A>G upstream_gene_variant 1.0
ald 3086788 c.-32T>A upstream_gene_variant 1.0
ald 3086797 c.-23G>A upstream_gene_variant 1.0
ald 3086803 c.-17T>C upstream_gene_variant 1.0
ald 3087020 c.201C>T synonymous_variant 1.0
ald 3087065 c.246C>T synonymous_variant 1.0
ald 3087070 p.Arg84Leu missense_variant 1.0
ald 3087074 c.255G>A synonymous_variant 1.0
ald 3087077 c.258A>C synonymous_variant 1.0
ald 3087079 p.His87Arg missense_variant 1.0
ald 3087140 c.321G>A synonymous_variant 1.0
ald 3087149 c.330C>T synonymous_variant 1.0
ald 3087152 c.333C>T synonymous_variant 1.0
ald 3087155 c.336C>A synonymous_variant 1.0
ald 3087158 c.339G>C synonymous_variant 1.0
ald 3087164 c.345T>C synonymous_variant 1.0
ald 3087316 p.Val166Ala missense_variant 1.0
ald 3087344 c.525C>T synonymous_variant 1.0
ald 3087380 c.561C>G synonymous_variant 1.0
ald 3087381 p.Asn188Gly missense_variant 1.0
ald 3087401 c.582T>C synonymous_variant 1.0
ald 3087500 c.681T>C synonymous_variant 1.0
ald 3087512 c.693T>C synonymous_variant 1.0
ald 3087527 c.708T>C synonymous_variant 1.0
ald 3087533 c.714C>A synonymous_variant 1.0
ald 3087554 c.735G>A synonymous_variant 1.0
ald 3087560 c.741C>T synonymous_variant 1.0
ald 3087644 c.825C>T synonymous_variant 1.0
ald 3087653 c.834A>G synonymous_variant 1.0
ald 3087743 c.924G>A synonymous_variant 1.0
ald 3087758 c.939G>A synonymous_variant 1.0
ald 3087800 p.His327Gln missense_variant 1.0
ald 3087833 c.1014A>G synonymous_variant 1.0
ald 3087857 c.1038C>T synonymous_variant 1.0
fbiD 3339049 c.-69C>T upstream_gene_variant 1.0
fbiD 3339402 c.285C>T synonymous_variant 1.0
fbiD 3339568 c.451C>T synonymous_variant 1.0
fbiD 3339734 p.Ala206Gly missense_variant 0.57
fbiD 3339746 p.Ala210Gly missense_variant 0.3
Rv3083 3448474 c.-30G>T upstream_gene_variant 1.0
Rv3083 3448611 c.108A>G synonymous_variant 1.0
Rv3083 3449305 c.802T>C synonymous_variant 1.0
Rv3083 3449400 c.897C>G synonymous_variant 1.0
Rv3083 3449454 c.951G>A synonymous_variant 1.0
Rv3083 3449868 c.1365C>A synonymous_variant 1.0
Rv3083 3449877 c.1374T>C synonymous_variant 1.0
Rv3083 3449885 p.Arg461Lys missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3475059 c.1053C>T synonymous_variant 1.0
fprA 3475159 p.Asn385Asp missense_variant 1.0
Rv3236c 3611968 c.1149T>G synonymous_variant 1.0
Rv3236c 3612208 c.909G>C synonymous_variant 1.0
Rv3236c 3612250 c.867A>G synonymous_variant 1.0
Rv3236c 3612319 c.798G>C synonymous_variant 1.0
Rv3236c 3612322 c.795G>C synonymous_variant 1.0
Rv3236c 3613038 c.79C>A synonymous_variant 1.0
Rv3236c 3613056 c.61C>T synonymous_variant 1.0
fbiB 3640899 c.-636G>A upstream_gene_variant 1.0
fbiB 3640980 c.-555C>T upstream_gene_variant 1.0
fbiB 3641909 c.375T>C synonymous_variant 1.0
fbiB 3642467 c.933T>C synonymous_variant 1.0
fbiB 3642599 c.1065C>T synonymous_variant 1.0
alr 3840226 p.Thr399Ala missense_variant 1.0
alr 3840527 c.894A>C synonymous_variant 1.0
alr 3840719 c.702A>G synonymous_variant 1.0
alr 3840914 c.507G>C synonymous_variant 1.0
alr 3840994 p.His143Asp missense_variant 1.0
alr 3841112 c.309T>C synonymous_variant 1.0
alr 3841116 p.Ala102Gly missense_variant 1.0
alr 3841172 c.249A>C synonymous_variant 1.0
alr 3841199 c.222T>C synonymous_variant 1.0
alr 3841419 p.Val1Ala missense_variant 1.0
rpoA 3877886 c.622C>T synonymous_variant 1.0
rpoA 3878001 c.507A>G synonymous_variant 1.0
rpoA 3878043 c.465G>T synonymous_variant 1.0
rpoA 3878124 c.384G>A synonymous_variant 1.0
rpoA 3878619 c.-113delC upstream_gene_variant 1.0
rpoA 3878630 c.-124_-123insCC upstream_gene_variant 1.0
ddn 3986805 c.-39G>C upstream_gene_variant 1.0
ddn 3987050 c.207C>T synonymous_variant 1.0
ddn 3987287 c.444T>C synonymous_variant 1.0
clpC1 4038227 c.2478G>T synonymous_variant 1.0
clpC1 4038443 c.2262G>A synonymous_variant 1.0
clpC1 4038683 c.2022T>C synonymous_variant 1.0
clpC1 4038746 c.1959C>T synonymous_variant 1.0
clpC1 4038779 c.1926C>T synonymous_variant 1.0
clpC1 4038848 c.1857C>T synonymous_variant 1.0
clpC1 4038860 c.1845G>C synonymous_variant 1.0
clpC1 4038878 c.1827A>G synonymous_variant 1.0
clpC1 4038974 c.1731T>C synonymous_variant 1.0
clpC1 4039046 c.1659C>T synonymous_variant 1.0
clpC1 4039058 c.1647C>T synonymous_variant 1.0
clpC1 4039094 c.1611C>T synonymous_variant 1.0
clpC1 4039100 c.1605C>T synonymous_variant 1.0
clpC1 4039274 c.1431G>C synonymous_variant 1.0
clpC1 4039336 c.1369C>T synonymous_variant 1.0
clpC1 4039352 c.1353C>T synonymous_variant 1.0
clpC1 4039448 c.1257A>G synonymous_variant 1.0
clpC1 4039454 c.1251A>G synonymous_variant 0.99
clpC1 4039502 c.1203C>T synonymous_variant 1.0
clpC1 4039682 c.1023C>A synonymous_variant 1.0
clpC1 4039700 c.1005C>T synonymous_variant 1.0
clpC1 4039718 c.987C>T synonymous_variant 1.0
clpC1 4039817 c.888A>C synonymous_variant 1.0
clpC1 4039820 c.885T>C synonymous_variant 1.0
clpC1 4039823 c.882T>G synonymous_variant 1.0
clpC1 4040045 c.660C>G synonymous_variant 1.0
clpC1 4040048 c.657C>T synonymous_variant 1.0
clpC1 4040063 c.642G>C synonymous_variant 1.0
clpC1 4040090 c.615T>C synonymous_variant 1.0
clpC1 4040093 c.612C>G synonymous_variant 1.0
clpC1 4040147 c.558A>G synonymous_variant 1.0
clpC1 4040159 c.546G>A synonymous_variant 0.99
clpC1 4040162 c.543G>C synonymous_variant 1.0
clpC1 4040213 c.492T>C synonymous_variant 1.0
clpC1 4040267 c.438A>G synonymous_variant 1.0
clpC1 4040273 c.432T>C synonymous_variant 1.0
clpC1 4040276 c.429C>G synonymous_variant 1.0
clpC1 4040279 c.426C>G synonymous_variant 1.0
clpC1 4040363 c.342A>G synonymous_variant 1.0
clpC1 4040393 c.312G>C synonymous_variant 1.0
clpC1 4040411 c.294T>C synonymous_variant 1.0
clpC1 4040423 c.282A>G synonymous_variant 1.0
clpC1 4040450 c.255A>G synonymous_variant 1.0
clpC1 4040471 c.234T>C synonymous_variant 1.0
clpC1 4040480 c.225T>C synonymous_variant 1.0
clpC1 4040534 c.171A>G synonymous_variant 1.0
clpC1 4040551 c.154T>C synonymous_variant 1.0
clpC1 4040573 c.132T>C synonymous_variant 1.0
clpC1 4040657 c.48T>G synonymous_variant 1.0
panD 4043932 p.Met117Thr missense_variant 1.0
panD 4044243 c.39C>G synonymous_variant 1.0
embC 4240060 c.198G>C synonymous_variant 1.0
embC 4240106 p.Leu82Met missense_variant 0.99
embC 4240237 c.375G>C synonymous_variant 1.0
embC 4240499 p.Ser213Arg missense_variant 1.0
embC 4240533 p.Ser224Thr missense_variant 1.0
embC 4240559 p.Ala233Thr missense_variant 1.0
embC 4240587 p.Gly242Ala missense_variant 1.0
embC 4240671 p.Thr270Ile missense_variant 1.0
embC 4241698 c.1836G>C synonymous_variant 1.0
embC 4241710 c.1848G>A synonymous_variant 1.0
embC 4241758 c.1896G>A synonymous_variant 1.0
embC 4241920 c.2058C>T synonymous_variant 0.99
embC 4241921 p.Gly687Arg missense_variant 0.99
embC 4242092 c.2230T>C synonymous_variant 1.0
embA 4242325 c.-908C>T upstream_gene_variant 1.0
embA 4242460 c.-773G>C upstream_gene_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242655 c.-578A>G upstream_gene_variant 1.0
embA 4242946 c.-287T>C upstream_gene_variant 1.0
embA 4243628 c.396A>G synonymous_variant 1.0
embA 4243649 c.417G>C synonymous_variant 1.0
embA 4243690 p.Met153Thr missense_variant 0.99
embA 4243961 c.729G>A synonymous_variant 1.0
embA 4244154 p.Thr308Pro missense_variant 1.0
embA 4244177 c.945G>C synonymous_variant 1.0
embA 4244178 p.Ala316Thr missense_variant 1.0
embA 4244312 c.1080T>G synonymous_variant 1.0
embA 4244846 c.1614C>G synonymous_variant 1.0
embA 4245023 c.1791A>G synonymous_variant 1.0
embB 4245764 c.-750G>T upstream_gene_variant 1.0
embB 4246193 c.-321C>T upstream_gene_variant 1.0
embA 4246443 p.Asp1071Asn missense_variant 1.0
embB 4246584 p.Arg24Pro missense_variant 0.2
embB 4247590 c.1077A>G synonymous_variant 1.0
embB 4247646 p.Glu378Ala missense_variant 1.0
embB 4247815 c.1302C>T synonymous_variant 1.0
embB 4248070 c.1557T>C synonymous_variant 1.0
embB 4248206 p.Ser565Gly missense_variant 1.0
embB 4248226 c.1713G>A synonymous_variant 1.0
aftB 4268331 p.Gln169Pro missense_variant 1.0
aftB 4268810 c.27G>T synonymous_variant 1.0
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269588 c.-752G>A upstream_gene_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
ubiA 4269811 p.Gln8Arg missense_variant 1.0
ethA 4326463 c.1011C>T synonymous_variant 1.0
ethA 4326740 p.Arg245His missense_variant 1.0
ethA 4327547 c.-75_-74insT upstream_gene_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407568 p.Ala212Val missense_variant 1.0
gid 4407572 p.Ile211Val missense_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407703 p.Ala167Val missense_variant 1.0
gid 4407705 c.498G>T synonymous_variant 1.0
gid 4407782 p.Ala141Thr missense_variant 1.0
gid 4407822 c.381A>G synonymous_variant 0.99
gid 4407943 p.Gln87Arg missense_variant 1.0
gid 4407951 c.252G>T synonymous_variant 1.0
gid 4408008 c.195C>G synonymous_variant 1.0
gid 4408110 p.Val31Ala missense_variant 1.0
gid 4408113 c.90T>C synonymous_variant 1.0
gid 4408153 p.Gly17Asp missense_variant 1.0
gid 4408176 c.27T>C synonymous_variant 1.0
gid 4408228 c.-28_-27delCA upstream_gene_variant 0.98
gyrA 9817 c.2517_*53delANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN frameshift_variant&stop_lost&splice_region_variant 1.0
alr 3841405 c.-1147_15del conservative_inframe_deletion 1.0