Rv1979c - p.Thr270Ala
Drug resistance types
116 Sensitive
1 RR-TB
27 HR-TB
22 MDR-TB
34 Pre-XDR-TB
1 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 176 |
| 29 | |
| lineage3;lineage2.2.1 | 2 |
| lineage3.1.2;lineage2.2.1 | 1 |
| lineage4.9;lineage4.1.1.3;lineage3;lineage2.2.1 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1;lineage1.1.1.1 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 217 |
Geographic prevalence
Country level data for this variant is available for 114 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22175213 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175245 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068598 | Sensitive | lineage2.2.1 | None | SRR22179528 | Sensitive | None | SRR24061597 | Sensitive | None | SRR24061600 | Sensitive | None | SRR24061598 | Sensitive | None | SRR26399349 | Sensitive | lineage2.2.1 | None | SRR24083633 | Sensitive | lineage2.2.1 | None | SRR26399154 | Sensitive | lineage2.2.1 | None | SRR24061599 | Sensitive | None | SRR25534244 | Sensitive | lineage2.2.1 | None | SRR26399381 | Sensitive | lineage2.2.1 | None | SRR26400051 | Sensitive | lineage2.2.1 | None | SRR26399539 | Sensitive | lineage2.2.1 | None | SRR26399758 | Other | lineage2.2.1 | None | SRR26399868 | Sensitive | lineage2.2.1 | None | SRR26399871 | Other | lineage2.2.1 | None | SRR26399426 | Sensitive | lineage2.2.1 | None | SRR26399870 | Sensitive | lineage2.2.1 | None | SRR26399220 | Sensitive | lineage2.2.1 | None | SRR27450360 | Sensitive | lineage2.2.1 | None | SRR26399937 | HR-TB | lineage2.2.1 | None | SRR26399492 | Other | lineage2.2.1 | None | SRR26399345 | Other | lineage2.2.1 | None | SRR26399743 | HR-TB | lineage2.2.1 | None | SRR27450264 | Sensitive | lineage2.2.1 | None | SRR26936998 | MDR-TB | lineage2.2.1 | None | SRR25827790 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR26399173 | HR-TB | lineage2.2.1 | None | SRR25827747 | Pre-XDR-TB | lineage3.1.2;lineage2.2.1 | None | SRR26399635 | Sensitive | lineage2.2.1 | None | SRR27450438 | Other | lineage2.2.1 | None | SRR26399787 | Sensitive | lineage2.2.1 | None | SRR26399909 | Sensitive | lineage2.2.1 | None | SRR26399658 | Sensitive | lineage2.2.1 | None | SRR26399864 | Other | lineage2.2.1 | None | SRR27450442 | HR-TB | lineage2.2.1 | None | SRR25534461 | Sensitive | lineage2.2.1 | None | SRR24083741 | Sensitive | lineage2.2.1 | None | ERR4816019 | Sensitive | None | ERR2199835 | Other | lineage2.2.1 | de | SRR1723800 | HR-TB | lineage2.2.1 | cn | ERR4815361 | Sensitive | None | SRR7496499 | Sensitive | lineage2.2.1 | us | ERR4817181 | Sensitive | None | ERR1035098 | Pre-XDR-TB | lineage2.2.1 | vn | DRR184897 | Sensitive | lineage2.2.1 | vn | SRR5073920 | HR-TB | lineage2.2.1 | vn | ERR3275464 | Sensitive | lineage2.2.1 | nl | SRR5065434 | Sensitive | lineage2.2.1 | vn | SRR5073878 | Sensitive | lineage2.2.1 | vn | SRR5073638 | HR-TB | lineage2.2.1 | vn | SRR5073712 | Sensitive | lineage2.2.1 | vn | SRR5073935 | MDR-TB | lineage2.2.1 | vn | SRR5073764 | MDR-TB | lineage2.2.1 | vn | SRR5073976 | Sensitive | lineage2.2.1 | vn | SRR5065221 | Sensitive | lineage2.2.1 | vn | SRR5073917 | Other | lineage2.2.1 | vn | SRR5073563 | Sensitive | lineage2.2.1 | vn | SRR5073828 | Sensitive | lineage2.2.1 | vn | SRR5073524 | Other | lineage2.2.1 | vn | SRR5065628 | Sensitive | lineage2.2.1 | vn | SRR5065601 | Sensitive | lineage2.2.1 | vn | SRR5065512 | Sensitive | lineage2.2.1 | vn | SRR5065674 | Sensitive | lineage2.2.1 | vn | SRR5065470 | RR-TB | lineage2.2.1 | vn | SRR5074185 | MDR-TB | lineage2.2.1 | vn | SRR5074148 | Sensitive | lineage2.2.1 | vn | SRR5065530 | Sensitive | lineage2.2.1 | vn | SRR5818661 | Sensitive | dj | SRR5818653 | Sensitive | dj | SRR5065669 | Sensitive | lineage2.2.1 | vn | SRR5818567 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818676 | Sensitive | dj | SRR5067439 | MDR-TB | lineage2.2.1 | vn | SRR5067686 | HR-TB | lineage2.2.1 | vn | SRR5818652 | Sensitive | dj | SRR5067706 | Sensitive | lineage2.2.1 | vn | SRR5067478 | Sensitive | lineage2.2.1 | vn | SRR5067520 | HR-TB | lineage2.2.1 | vn | SRR5067316 | Sensitive | lineage2.2.1 | vn | SRR5067623 | HR-TB | lineage2.2.1 | vn | SRR5067340 | HR-TB | lineage2.2.1 | vn | SRR5067251 | HR-TB | lineage2.2.1 | vn | SRR5067456 | Sensitive | lineage2.2.1 | vn | SRR5067502 | Other | lineage2.2.1 | vn | SRR5067570 | Sensitive | lineage2.2.1 | vn | SRR5067462 | HR-TB | lineage2.2.1 | vn | SRR5067555 | Sensitive | lineage2.2.1 | vn | SRR5073527 | HR-TB | lineage2.2.1 | vn | SRR5067595 | HR-TB | lineage2.2.1 | vn | SRR5073568 | HR-TB | lineage2.2.1 | vn | DRR184979 | Sensitive | lineage2.2.1 | vn | ERR3275459 | Sensitive | lineage2.2.1 | nl | ERR7911516 | MDR-TB | lineage2.2.1 | vn | SRR5073961 | Other | lineage2.2.1 | vn | ERR7911508 | MDR-TB | lineage2.2.1 | vn | SRR5065321 | Sensitive | lineage2.2.1 | None | SRR6152813 | HR-TB | lineage2.2.1 | ca | SRR5818605 | Sensitive | None | ERR4819927 | Sensitive | None | ERR2446485 | Sensitive | lineage2.2.1 | nl | ERR2446503 | Sensitive | lineage2.2.1 | nl | ERR4821046 | Sensitive | None | ERR4798760 | Pre-XDR-TB | lineage2.2.1 | in | SRR5818685 | Sensitive | None | ERR4799148 | Pre-XDR-TB | lineage2.2.1 | in | ERR4822451 | Sensitive | lineage2.2.1 | de | ERR4798816 | Pre-XDR-TB | lineage4.9;lineage4.1.1.3;lineage3;lineage2.2.1 | in | ERR4831225 | Sensitive | lineage2.2.1 | de | ERR4797975 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797898 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797967 | MDR-TB | lineage2.2.1 | in | ERR4798033 | MDR-TB | lineage2.2.1 | in | ERR4796509 | Pre-XDR-TB | lineage2.2.1 | in | ERR2843528 | Sensitive | lineage2.2.1 | None | ERR4799011 | MDR-TB | lineage2.2.1 | in | ERR4799440 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798368 | Pre-XDR-TB | lineage2.2.1 | in | ERR2517145 | Sensitive | lineage2.2.1 | nl | ERR2517414 | Sensitive | lineage2.2.1 | nl | ERR4796690 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796389 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796613 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797580 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798249 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798274 | Pre-XDR-TB | lineage2.2.1 | in | ERR4828642 | HR-TB | lineage2.2.1 | None | ERR4799083 | MDR-TB | lineage2.2.1 | in | ERR4799299 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797510 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797438 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798355 | MDR-TB | lineage2.2.1 | in | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799519 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799472 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR4799734 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800282 | Pre-XDR-TB | lineage2.2.1 | in | ERR4816381 | HR-TB | lineage2.2.1 | gb | ERR4800497 | Pre-XDR-TB | lineage2.2.1 | in | SRR8217888 | Sensitive | lineage2.2.1 | None | ERR2503439 | Sensitive | lineage2.2.1 | fi | SRR8217905 | Sensitive | lineage2.2.1 | None | ERR11043130 | MDR-TB | lineage2.2.1 | None | ERR10370892 | Other | lineage4.9 | None | ERR3597005 | Sensitive | None | ERR11044961 | Sensitive | lineage2.2.1 | None | ERR3597003 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597007 | Sensitive | None | ERR3597006 | Sensitive | None | ERR3597002 | Sensitive | None | ERR4831764 | MDR-TB | lineage2.2.1 | vn | ERR4831750 | HR-TB | lineage2.2.1 | vn | ERR4831768 | HR-TB | lineage2.2.1 | vn | ERR4831984 | MDR-TB | lineage2.2.1 | vn | ERR4831771 | MDR-TB | lineage2.2.1 | vn | ERR4831761 | MDR-TB | lineage2.2.1 | vn | ERR4831917 | HR-TB | lineage2.2.1 | vn | ERR4831844 | HR-TB | lineage2.2.1 | vn | ERR4831826 | MDR-TB | lineage2.2.1 | vn | ERR4831866 | MDR-TB | lineage2.2.1 | vn | ERR4830359 | Other | lineage2.2.1;lineage1.1.1.1 | vn | ERR4830333 | Sensitive | lineage2.2.1 | vn | ERR4830284 | HR-TB | lineage2.2.1 | vn | ERR4798997 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830375 | Sensitive | lineage2.2.1 | vn | ERR4830420 | Sensitive | lineage2.2.1 | vn | ERR4830434 | Sensitive | lineage2.2.1 | vn | ERR4828421 | Sensitive | lineage2.2.1 | vn | ERR4830325 | Sensitive | lineage2.2.1 | vn | ERR4830374 | Sensitive | lineage2.2.1 | vn | ERR4828429 | Sensitive | lineage4.5;lineage2.2.1 | vn | SRR26936987 | Pre-XDR-TB | lineage2.2.1 | None | ERR7451301 | Sensitive | None | SRR21732966 | Sensitive | lineage2.2.1 | None | ERR7451300 | Sensitive | None | SRR24083705 | Sensitive | lineage2.2.1 | None | SRR24083658 | Sensitive | lineage2.2.1 | None | SRR24083661 | Sensitive | lineage2.2.1 | None | ERR7737809 | MDR-TB | lineage2.2.1 | None | SRR22249833 | Other | lineage2.2.1 | None | ERR7737775 | MDR-TB | lineage2.2.1 | None | SRR21732939 | Sensitive | lineage2.2.1 | None | SRR22251066 | HR-TB | lineage2.2.1 | None | ERR9119252 | Sensitive | lineage2.2.1 | None | ERR9119200 | Sensitive | lineage2.2.1 | None | ERR9119388 | Sensitive | lineage2.2.1 | None | ERR9119279 | HR-TB | lineage2.2.1 | None | ERR9119426 | Sensitive | lineage2.2.1 | None | ERR9119395 | Sensitive | lineage2.2.1 | None | ERR9119443 | Sensitive | lineage2.2.1 | None | ERR9125480 | Sensitive | None | ERR9892007 | Sensitive | lineage2.2.1 | None | SRR125287 | Sensitive | lineage2.2.1 | None | SRR1735586 | Other | lineage2.2.1 | None | SRR125288 | Sensitive | lineage2.2.1;lineage1.1.1.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058668 | Sensitive | None | SRR12470242 | HR-TB | lineage5.1.1 | None | SRR125308 | Sensitive | lineage2.2.1 | None | DRR261189 | Sensitive | lineage2.2.1 | None | DRR261182 | Sensitive | lineage2.2.1 | None | DRR261180 | Sensitive | lineage2.2.1 | None | SRR1735588 | Sensitive | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | DRR261155 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR25827430 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | SRR21277480 | Sensitive | lineage4.4 | None | SRR25827503 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827543 | XDR-TB | lineage3;lineage2.2.1 | None | SRR21677059 | Sensitive | lineage2.2.1 | None |
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