Rv1979c - p.Thr270Ala


Drug resistance types
155 Sensitive 1 RR-TB 33 HR-TB 26 MDR-TB 44 Pre-XDR-TB 6 XDR-TB 37 Other
lineage Counts
lineage Count
M.canetti 66
lineage2.2.1;lineage3 2
lineage2.2.1 211
La3;M.canetti 11
lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.4 1
lineage2.2.1;lineage4.9 1
lineage2.2.1;lineage3.1.2 1
lineage2.2.1;lineage4.5 2
lineage1.1.1.1;lineage2.2.1 2
La2;M.canetti 1
lineage2.2.1;lineage4.1.2.1 1
lineage2.2.1;lineage4.8 1
spoligotype Counts
spoligotype Count
None 302
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10177263 Sensitive M.canetti None
SRR10177258 Other M.canetti None
SRR5818661 Other M.canetti dj
SRR25827790 XDR-TB lineage2.2.1;lineage3 None
ERR13261465 Pre-XDR-TB lineage2.2.1 None
SRR30182660 Sensitive lineage2.2.1 None
SRR5065601 Sensitive lineage2.2.1 vn
ERR4831917 HR-TB lineage2.2.1 vn
SRR26399345 Other lineage2.2.1 None
ERR4799472 Pre-XDR-TB lineage2.2.1 in
SRR5073568 HR-TB lineage2.2.1 vn
SRR5073764 MDR-TB lineage2.2.1 vn
SRR5818676 Other M.canetti dj
ERR13266634 Other lineage2.2.1 None
SRR24061598 Sensitive M.canetti None
ERR1336821 Sensitive La3;M.canetti None
ERR13267118 Pre-XDR-TB lineage2.2.1 None
ERR13261201 MDR-TB lineage2.2.1 None
SRR21689933 HR-TB lineage2.2.1 None
ERR551182 Sensitive M.canetti None
ERR4831225 Sensitive lineage2.2.1 de
SRR26399381 Sensitive lineage2.2.1 None
SRR26399758 Other lineage2.2.1 None
ERR4831826 MDR-TB lineage2.2.1 vn
ERR4797967 MDR-TB lineage2.2.1 in
ERR4798760 Pre-XDR-TB lineage2.2.1 in
SRR5067502 Other lineage2.2.1 vn
SRR26399658 Sensitive lineage2.2.1 None
SRR29881206 Sensitive lineage2.2.1 None
SRR10177260 Other M.canetti None
SRR26399870 Sensitive lineage2.2.1 None
SRR28170812 Sensitive M.canetti None
SRR5818605 Other M.canetti None
ERR2446485 Sensitive lineage2.2.1 nl
ERR4830420 Sensitive lineage2.2.1 vn
SRR29230860 Sensitive lineage2.2.1 None
ERR1336826 Sensitive La3;M.canetti None
SRR22249833 Other lineage2.2.1 None
ERR9119388 Sensitive lineage2.2.1 None
ERR551180 Sensitive M.canetti None
SRR25827791 Pre-XDR-TB lineage2.2.1 None
ERR4798816 Pre-XDR-TB lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 in
ERR7911516 MDR-TB lineage2.2.1 vn
SRR25515094 Sensitive lineage2.2.1 None
SRR10177262 Sensitive M.canetti None
SRR5073920 HR-TB lineage2.2.1 vn
SRR5073917 Other lineage2.2.1 vn
ERR2843528 Sensitive lineage2.2.1 None
SRR28044618 Pre-XDR-TB lineage2.2.1 None
ERR7737809 MDR-TB lineage2.2.1 None
ERR4817181 Sensitive M.canetti None
SRR5065512 Sensitive lineage2.2.1 vn
SRR5073638 HR-TB lineage2.2.1 vn
SRR6152813 HR-TB lineage2.2.1 ca
SRR27450442 HR-TB lineage2.2.1 None
ERR3597003 Sensitive M.canetti None
ERR4799519 Pre-XDR-TB lineage2.2.1 in
SRR22175245 Pre-XDR-TB lineage2.2.1 None
SRR5065470 RR-TB lineage2.2.1 vn
SRR25827430 Pre-XDR-TB lineage2.2.1;lineage4 None
ERR4830333 Sensitive lineage2.2.1 vn
ERR3597005 Sensitive M.canetti None
ERR4819927 Sensitive M.canetti None
ERR551179 Sensitive M.canetti None
SRR29050775 Sensitive lineage2.2.1 None
ERR13439894 HR-TB lineage2.2.1 None
SRR21732966 Sensitive lineage2.2.1 None
ERR4830325 Sensitive lineage2.2.1 vn
ERR4799148 Pre-XDR-TB lineage2.2.1 in
SRR21677059 Sensitive lineage2.2.1 None
SRR26936998 MDR-TB lineage2.2.1 None
ERR4797975 Pre-XDR-TB lineage2.2.1 in
SRR5067478 Sensitive lineage2.2.1 vn
ERR1336822 Sensitive M.canetti None
SRR26399220 Sensitive lineage2.2.1 None
ERR4821046 Sensitive M.canetti None
ERR4796389 Pre-XDR-TB lineage2.2.1 in
ERR9119252 Sensitive lineage2.2.1 None
ERR9119443 Sensitive lineage2.2.1 None
SRR26399909 Sensitive lineage2.2.1 None
SRR5065628 Sensitive lineage2.2.1 vn
SRR27450360 Sensitive lineage2.2.1 None
SRR5073878 Sensitive lineage2.2.1 vn
ERR4831764 MDR-TB lineage2.2.1 vn
ERR552304 Sensitive M.canetti None
SRR125308 Sensitive lineage2.2.1 None
SRR5818567 Other M.canetti dj
SRR10522763 Sensitive M.canetti None
SRR21277480 Sensitive lineage4.4 None
SRR16058668 Sensitive M.canetti None
ERR266107 Other M.canetti None
ERR4798997 Pre-XDR-TB lineage2.2.1 None
ERR4797580 Pre-XDR-TB lineage2.2.1 in
ERR551055 Sensitive M.canetti None
SRR5073524 Other lineage2.2.1 vn
DRR261155 Sensitive lineage2.2.1;lineage4.9 None
SRR6650709 Sensitive M.canetti None
ERR11043130 MDR-TB lineage2.2.1 None
SRR5067686 HR-TB lineage2.2.1 vn
SRR5073935 MDR-TB lineage2.2.1 vn
ERR13439878 HR-TB lineage2.2.1 None
SRR5067520 HR-TB lineage2.2.1 vn
SRR25827747 XDR-TB lineage2.2.1;lineage3.1.2 None
ERR13285624 HR-TB lineage2.2.1 None
SRR10177259 Other M.canetti None
ERR1035098 Pre-XDR-TB lineage2.2.1 vn
SRR29051432 HR-TB lineage2.2.1 None
SRR10522783 Sensitive M.canetti None
SRR5067706 Sensitive lineage2.2.1 vn
ERR7911508 MDR-TB lineage2.2.1 vn
SRR8217905 Sensitive lineage2.2.1 None
ERR3597002 Other M.canetti None
ERR552307 Sensitive M.canetti None
ERR11044961 Sensitive lineage2.2.1 None
ERR13260967 Pre-XDR-TB lineage2.2.1 None
SRR26399635 Sensitive lineage2.2.1 None
ERR1336825 Sensitive La3;M.canetti None
ERR4831750 HR-TB lineage2.2.1 vn
ERR313115 Other M.canetti None
ERR9119279 HR-TB lineage2.2.1 None
ERR3597006 Other La3;M.canetti None
ERR2517145 Sensitive lineage2.2.1 nl
ERR13266079 Pre-XDR-TB lineage2.2.1 None
ERR4828421 Sensitive lineage2.2.1 vn
ERR4831761 MDR-TB lineage2.2.1 vn
ERR13266659 Pre-XDR-TB lineage2.2.1 None
ERR266106 Sensitive M.canetti None
ERR4828429 Sensitive lineage2.2.1;lineage4.5 vn
SRR29056248 Sensitive M.canetti None
ERR13266691 Pre-XDR-TB lineage2.2.1 None
SRR8217888 Sensitive lineage2.2.1 None
ERR4816381 HR-TB lineage2.2.1 gb
SRR30146986 Sensitive lineage2.2.1 None
SRR5073961 Other lineage2.2.1 vn
SRR125288 Sensitive lineage1.1.1.1;lineage2.2.1 None
SRR5067555 Sensitive lineage2.2.1 vn
SRR25827503 Pre-XDR-TB lineage2.2.1 None
SRR26399937 HR-TB lineage2.2.1 None
SRR18289196 Sensitive M.canetti None
SRR18289195 Sensitive M.canetti None
SRR5073527 HR-TB lineage2.2.1 vn
SRR5067623 HR-TB lineage2.2.1 vn
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
SRR1723800 HR-TB lineage2.2.1 cn
ERR1336820 Sensitive La3;M.canetti None
ERR13290874 Pre-XDR-TB lineage2.2.1 None
ERR9125475 Other M.canetti None
SRR5065674 Sensitive lineage2.2.1 vn
SRR5073976 Sensitive lineage2.2.1 vn
ERR9119395 Sensitive lineage2.2.1 None
ERR4828642 HR-TB lineage2.2.1 None
SRR5065221 Sensitive lineage2.2.1 vn
SRR25534244 Sensitive lineage2.2.1 None
ERR4830375 Sensitive lineage2.2.1 vn
SRR24083705 Sensitive lineage2.2.1 None
ERR13267033 Pre-XDR-TB lineage2.2.1 None
ERR13260028 MDR-TB lineage2.2.1 None
SRR5074185 MDR-TB lineage2.2.1 vn
ERR7451301 Sensitive M.canetti None
SRR26399864 Other lineage2.2.1 None
ERR13290862 Pre-XDR-TB lineage2.2.1 None
SRR26399787 Sensitive lineage2.2.1 None
SRR24083741 Sensitive lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
DRR184897 Sensitive lineage2.2.1 vn
ERR266124 Other M.canetti None
ERR9119426 Sensitive lineage2.2.1 None
SRR1735586 Sensitive lineage2.2.1 None
ERR1043164 Other La3;M.canetti None
ERR13291330 Sensitive lineage2.2.1 None
SRR5065530 Sensitive lineage2.2.1 vn
DRR261182 Sensitive lineage2.2.1 None
ERR13262158 Pre-XDR-TB lineage2.2.1 None
ERR4798355 MDR-TB lineage2.2.1 in
SRR26399743 HR-TB lineage2.2.1 None
SRR27450264 Sensitive lineage2.2.1 None
SRR5067439 MDR-TB lineage2.2.1 vn
SRR5074148 Sensitive lineage2.2.1 vn
SRR125287 Sensitive lineage2.2.1 None
ERR3275464 Sensitive lineage2.2.1 nl
SRR28351186 Pre-XDR-TB lineage2.2.1 None
DRR261180 Sensitive lineage2.2.1 None
SRR26399426 Sensitive lineage2.2.1 None
ERR1043163 Other La3;M.canetti None
ERR3275459 Sensitive lineage2.2.1 nl
ERR4798033 MDR-TB lineage2.2.1 in
ERR4822451 Sensitive lineage2.2.1 de
ERR4830374 Sensitive lineage2.2.1 vn
ERR4831866 MDR-TB lineage2.2.1 vn
SRR22179528 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
ERR313114 Sensitive M.canetti None
SRR5818668 Sensitive M.canetti dj
SRR5818685 Sensitive M.canetti None
SRR5067251 HR-TB lineage2.2.1 vn
SRR5073828 Sensitive lineage2.2.1 vn
SRR1735588 Sensitive lineage2.2.1 None
ERR266121 Sensitive M.canetti None
SRR24061597 Sensitive M.canetti None
SRR5073563 Sensitive lineage2.2.1 vn
ERR13266989 MDR-TB lineage2.2.1 None
SRR24061599 Sensitive M.canetti None
SRR24061600 Sensitive M.canetti None
SRR26399871 Other lineage2.2.1 None
ERR266122 Sensitive La3;M.canetti None
ERR4797438 Pre-XDR-TB lineage2.2.1 in
ERR4799011 MDR-TB lineage2.2.1 in
ERR4796690 Pre-XDR-TB lineage2.2.1 in
SRR5065321 Sensitive lineage2.2.1 None
SRR5067340 HR-TB lineage2.2.1 vn
SRR26399173 HR-TB lineage2.2.1 None
ERR11068598 Sensitive lineage2.2.1 None
ERR266126 Sensitive La2;M.canetti None
ERR4797510 Pre-XDR-TB lineage2.2.1 in
ERR4798666 Pre-XDR-TB lineage2.2.1 in
ERR9119200 Sensitive lineage2.2.1 None
ERR266123 Sensitive M.canetti None
ERR313116 Sensitive M.canetti None
SRR24083658 Sensitive lineage2.2.1 None
ERR266125 Other La3;M.canetti None
SRR5065434 Sensitive lineage2.2.1 vn
ERR3597001 Sensitive M.canetti None
ERR4798249 Pre-XDR-TB lineage2.2.1 in
ERR4799440 Pre-XDR-TB lineage2.2.1 in
SRR5065669 Sensitive lineage2.2.1 vn
ERR4830284 HR-TB lineage2.2.1 vn
SRR26400051 Sensitive lineage2.2.1 None
ERR4798274 Pre-XDR-TB lineage2.2.1 in
ERR4799299 Pre-XDR-TB lineage2.2.1 in
ERR13266394 Pre-XDR-TB lineage2.2.1 None
ERR4831768 HR-TB lineage2.2.1 vn
ERR4830434 Sensitive lineage2.2.1 vn
ERR4800497 Pre-XDR-TB lineage2.2.1 in
ERR13278956 MDR-TB lineage2.2.1 None
SRR5067462 HR-TB lineage2.2.1 vn
ERR4831771 MDR-TB lineage2.2.1 vn
ERR7737775 MDR-TB lineage2.2.1 None
ERR2446503 Sensitive lineage2.2.1 nl
ERR3597004 Sensitive M.canetti None
SRR5073712 Sensitive lineage2.2.1 vn
SRR22175213 XDR-TB lineage2.2.1 None
SRR7496499 Sensitive lineage2.2.1 us
DRR261189 Sensitive lineage2.2.1 None
SRR5818614 Sensitive M.canetti dj
ERR4815361 Other M.canetti None
SRR27450438 Other lineage2.2.1 None
SRR10177261 Sensitive M.canetti None
SRR29217217 Sensitive lineage2.2.1 None
ERR1336824 Sensitive La3;M.canetti None
SRR26399539 Sensitive lineage2.2.1 None
ERR2517414 Sensitive lineage2.2.1 nl
ERR4831844 HR-TB lineage2.2.1 vn
ERR551056 Sensitive M.canetti None
ERR266110 Other M.canetti None
ERR266108 Sensitive M.canetti None
ERR4796509 Pre-XDR-TB lineage2.2.1 in
ERR9892007 Sensitive lineage2.2.1 None
SRR22251066 HR-TB lineage2.2.1 None
ERR13266696 Pre-XDR-TB lineage2.2.1 None
ERR313113 Other M.canetti None
SRR25534461 Sensitive lineage2.2.1 None
SRR26399349 Sensitive lineage2.2.1 None
SRR5067570 Sensitive lineage2.2.1 vn
SRR26399154 Sensitive lineage2.2.1 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR29681362 HR-TB lineage2.2.1 None
ERR4799083 MDR-TB lineage2.2.1 in
SRR25827543 XDR-TB lineage2.2.1;lineage3 None
ERR4831984 MDR-TB lineage2.2.1 vn
ERR13267119 HR-TB lineage2.2.1;lineage4.1.2.1 None
ERR13266119 Pre-XDR-TB lineage2.2.1 None
ERR551057 Other M.canetti None
ERR4798368 Pre-XDR-TB lineage2.2.1 in
SRR29690800 Sensitive lineage2.2.1 None
ERR9125480 Sensitive M.canetti None
ERR2503439 Sensitive lineage2.2.1 fi
ERR313117 Other M.canetti None
DRR184979 Sensitive lineage2.2.1 vn
SRR5067456 Sensitive lineage2.2.1 vn
ERR266120 Sensitive M.canetti None
SRR5818652 Sensitive M.canetti dj
SRR5818653 Sensitive M.canetti dj
ERR13266671 Pre-XDR-TB lineage2.2.1 None
ERR4830359 Other lineage1.1.1.1;lineage2.2.1 vn
ERR3597007 Sensitive M.canetti None
ERR2199835 Other lineage2.2.1 de
ERR4800282 Pre-XDR-TB lineage2.2.1 in
SRR5067316 Sensitive lineage2.2.1 vn
SRR26399868 Sensitive lineage2.2.1 None
SRR29050728 Sensitive lineage2.2.1;lineage4.5 None
ERR4797898 XDR-TB lineage2.2.1 in
SRR24083633 Sensitive lineage2.2.1 None
SRR25827780 XDR-TB lineage2.2.1;lineage4.8 None
SRR24083661 Sensitive lineage2.2.1 None
ERR266109 Sensitive M.canetti None
SRR26399492 Other lineage2.2.1 None
SRR26936987 Pre-XDR-TB lineage2.2.1 None
SRR30333232 Sensitive lineage2.2.1 None
ERR13262066 Pre-XDR-TB lineage2.2.1 None
SRR21732939 Sensitive lineage2.2.1 None
SRR5067595 HR-TB lineage2.2.1 vn