Rv3596c - c.1959C>T
Drug resistance types
82 Sensitive
0 RR-TB
5 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 66 |
| La3;M.canetti | 11 |
| lineage2.2.1 | 1 |
| La2;M.canetti | 1 |
| lineage4.9 | 22 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR313114 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR551179 | Sensitive | M.canetti | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR6650709 | Sensitive | M.canetti | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR313113 | Other | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR18289195 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR7451300 | Sensitive | M.canetti | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR266109 | Sensitive | M.canetti | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR10177260 | Other | M.canetti | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | ERR3597003 | Sensitive | M.canetti | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR22179528 | Sensitive | M.canetti | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR313116 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR266107 | Other | M.canetti | None | ERR551055 | Sensitive | M.canetti | None | SRR5818614 | Sensitive | M.canetti | dj | ERR4815361 | Other | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | ERR551056 | Sensitive | M.canetti | None | ERR266110 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR313115 | Other | M.canetti | None | ERR551057 | Other | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | SRR5818653 | Sensitive | M.canetti | dj | ERR3283021 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR3597007 | Sensitive | M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5818661 | Other | M.canetti | dj | SRR24061598 | Sensitive | M.canetti | None | ERR551182 | Sensitive | M.canetti | None | SRR6044835 | Other | lineage4.9 | None | ERR266124 | Other | M.canetti | None | SRR1238558 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | ERR266121 | Sensitive | M.canetti | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4819927 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR552304 | Sensitive | M.canetti | None | SRR5818567 | Other | M.canetti | dj | ERR3597004 | Sensitive | M.canetti | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR16058668 | Sensitive | M.canetti | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR266108 | Sensitive | M.canetti | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR552307 | Sensitive | M.canetti | None | SRR16156817 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR266106 | Sensitive | M.canetti | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR18289196 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR1183054 | Sensitive | lineage4.9 | None | SRR16058674 | Other | M.canetti | None | SRR1181349 | Sensitive | lineage4 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR5818676 | Other | M.canetti | dj | ERR1336821 | Sensitive | La3;M.canetti | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR10177262 | Sensitive | M.canetti | None |
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