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SRA data
Rv3245c
- c.171T>C
Drug resistance types
11 Sensitive
1 RR-TB
19 HR-TB
6 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
21 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
12
La3;M.canetti
9
M.canetti
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
2
La1.6;La3;lineage4.6.4;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.9
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
lineage4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
59
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1043163
Other
La3;M.canetti
None
ERR1043164
Other
La3;M.canetti
None
ERR1336820
Sensitive
La3;M.canetti
None
ERR1336821
Sensitive
La3;M.canetti
None
ERR1336823
Sensitive
La3;M.canetti
None
ERR1336824
Sensitive
La3;M.canetti
None
ERR1336825
Sensitive
La3;M.canetti
None
ERR1336826
Sensitive
La3;M.canetti
None
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