SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR4817181
|
Sensitive
|
M.canetti
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR3597003
|
Sensitive
|
M.canetti
|
None
|
ERR313114
|
Sensitive
|
M.canetti
|
None
|
SRR24061597
|
Sensitive
|
M.canetti
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR3439432
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR266126
|
Sensitive
|
La2;M.canetti
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
ERR266123
|
Sensitive
|
M.canetti
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR4821046
|
Sensitive
|
M.canetti
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR16058668
|
Sensitive
|
M.canetti
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
ERR4815361
|
Other
|
M.canetti
|
None
|
SRR6650709
|
Sensitive
|
M.canetti
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR3797061
|
Other
|
La1.6;La3;lineage4.9
|
None
|
ERR1336824
|
Sensitive
|
La3;M.canetti
|
None
|
ERR266110
|
Other
|
M.canetti
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675446
|
RR-TB
|
lineage4.9
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
ERR3597002
|
Other
|
M.canetti
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR266120
|
Sensitive
|
M.canetti
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
ERR3597007
|
Sensitive
|
M.canetti
|
None
|
ERR551181
|
Sensitive
|
M.canetti
|
None
|
SRR16058674
|
Other
|
M.canetti
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
SRR10177258
|
Other
|
M.canetti
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
ERR551182
|
Sensitive
|
M.canetti
|
None
|
ERR11488822
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR266124
|
Other
|
M.canetti
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
SRR5818668
|
Sensitive
|
M.canetti
|
dj
|
SRR5818685
|
Sensitive
|
M.canetti
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR266121
|
Sensitive
|
M.canetti
|
None
|
SRR24061599
|
Sensitive
|
M.canetti
|
None
|
SRR24061600
|
Sensitive
|
M.canetti
|
None
|
ERR266122
|
Sensitive
|
La3;M.canetti
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
ERR313116
|
Sensitive
|
M.canetti
|
None
|
ERR551179
|
Sensitive
|
M.canetti
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR3597001
|
Sensitive
|
M.canetti
|
None
|
ERR1336822
|
Sensitive
|
M.canetti
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR9786384
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR266107
|
Other
|
M.canetti
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR551055
|
Sensitive
|
M.canetti
|
None
|
SRR5818614
|
Sensitive
|
M.canetti
|
dj
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR10177261
|
Sensitive
|
M.canetti
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
ERR266108
|
Sensitive
|
M.canetti
|
None
|
SRR10177259
|
Other
|
M.canetti
|
None
|
SRR10522783
|
Sensitive
|
M.canetti
|
None
|
ERR313113
|
Other
|
M.canetti
|
None
|
ERR552307
|
Sensitive
|
M.canetti
|
None
|
ERR2693254
|
Other
|
La1.6;La3;lineage4.9
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR551057
|
Other
|
M.canetti
|
None
|
ERR266106
|
Sensitive
|
M.canetti
|
None
|
ERR9125480
|
Sensitive
|
M.canetti
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR18289195
|
Sensitive
|
M.canetti
|
None
|
SRR5818652
|
Sensitive
|
M.canetti
|
dj
|
ERR9125475
|
Other
|
M.canetti
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR4816019
|
Sensitive
|
M.canetti
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR10177263
|
Sensitive
|
M.canetti
|
None
|
ERR7451301
|
Sensitive
|
M.canetti
|
None
|
SRR5818676
|
Other
|
M.canetti
|
dj
|
SRR24061598
|
Sensitive
|
M.canetti
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
SRR10177260
|
Other
|
M.canetti
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR29097066
|
Sensitive
|
lineage4.9
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR551180
|
Sensitive
|
M.canetti
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
SRR10177262
|
Sensitive
|
M.canetti
|
None
|
SRR22179528
|
Sensitive
|
M.canetti
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR3597005
|
Sensitive
|
M.canetti
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
ERR4819927
|
Sensitive
|
M.canetti
|
None
|
ERR266125
|
Other
|
La3;M.canetti
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
ERR552304
|
Sensitive
|
M.canetti
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR3597004
|
Sensitive
|
M.canetti
|
None
|
SRR5818567
|
Other
|
M.canetti
|
dj
|
SRR10522763
|
Sensitive
|
M.canetti
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR313115
|
Other
|
M.canetti
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR3597006
|
Other
|
La3;M.canetti
|
None
|
ERR313117
|
Other
|
M.canetti
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR18289196
|
Sensitive
|
M.canetti
|
None
|
SRR5818653
|
Sensitive
|
M.canetti
|
dj
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR4799171
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR266109
|
Sensitive
|
M.canetti
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
SRR5818661
|
Other
|
M.canetti
|
dj
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR552305
|
Sensitive
|
M.canetti
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR26399265
|
Other
|
lineage2.2.1
|
None
|
SRR28170812
|
Sensitive
|
M.canetti
|
None
|
SRR5818605
|
Other
|
M.canetti
|
None
|