lineage | Count |
---|---|
92 | |
lineage4 | 15 |
lineage4.9 | 6 |
lineage5.2 | 2 |
lineage4.2.1.1 | 1 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage2.2 | 3 |
La1 | 2 |
lineage2.2.1 | 4 |
lineage4.8 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.1.1 | 2 |
lineage2.1 | 2 |
La1.7.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 137 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675550 | Other | None | SRR5818653 | Sensitive | dj | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4817181 | Sensitive | None | ERR4816656 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5818661 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818567 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818676 | Sensitive | dj | ERR4818929 | HR-TB | None | SRR5818652 | Sensitive | dj | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | ERR4821655 | Sensitive | lineage4 | None | ERR4819927 | Sensitive | None | ERR4821046 | Sensitive | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR5818685 | Sensitive | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR5818605 | Sensitive | None | SRR6046362 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | ERR2693232 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | ERR4830353 | Other | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR294266 | HR-TB | None | ERR1063857 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR502889 | Other | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063859 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3439432 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3597003 | Sensitive | None | ERR3445502 | HR-TB | lineage4 | None | ERR3597002 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597005 | Sensitive | None | ERR3597006 | Sensitive | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3597007 | Sensitive | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR3797064 | Sensitive | None | ERR3797061 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR6358991 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR7451301 | Sensitive | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR7451300 | Sensitive | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9125480 | Sensitive | None | ERR9119669 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR16058668 | Sensitive | None | SRR1180270 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR24061597 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | SRR22179528 | Sensitive | None | SRR24061599 | Sensitive | None | SRR24061598 | Sensitive | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR24061600 | Sensitive | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675502 | Other | None | SRR3675488 | HR-TB | None | ERR4815361 | Sensitive | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675222 | Other | None | SRR3416776 | Other | lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675234 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816019 | Sensitive | None |
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