| lineage | Count |
|---|---|
| M.canetti | 33 |
| lineage4.3.4.2 | 26 |
| lineage4.3.4.2.1 | 136 |
| lineage4.3.4 | 1 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| spoligotype | Count |
|---|---|
| None | 198 |
| ID | Drug resistance | Lineage | Country iso2 | ERR313115 | Sensitive | M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR266125 | Other | M.canetti | None | ERR266124 | Other | M.canetti | None | ERR313113 | Sensitive | M.canetti | None | ERR3597006 | Sensitive | M.canetti | None | ERR3597004 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR551182 | Sensitive | M.canetti | None | ERR551057 | Sensitive | M.canetti | None | SAMEA104362398 | MDR-TB | lineage4.3.4.2 | None | ERR7451300 | Sensitive | M.canetti | None | SRR13180315 | HR-TB | lineage4.3.4.2 | None | SRR22179528 | Sensitive | M.canetti | None | SRR16058668 | Sensitive | M.canetti | None | SRR16058674 | Sensitive | M.canetti | None | SRR29055582 | Sensitive | lineage4.3.4.2.1 | None | SRR29056248 | Sensitive | M.canetti | None | SRR29093783 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR29096633 | MDR-TB | lineage4.3.4.2.1 | None | ERR3275986 | Sensitive | lineage4.3.4.2 | nl | SRR5818685 | Sensitive | M.canetti | None | SRR8866470 | Sensitive | lineage4.3.4.2 | None | ERR1193653 | Sensitive | lineage4.3.4.2.1 | ug | ERR3275647 | Sensitive | lineage4.3.4.2 | nl | ERR3275265 | Sensitive | lineage4.3.4.2.1 | nl | ERR3275638 | Sensitive | lineage4.3.4.2 | nl | ERR3275603 | Sensitive | lineage4.3.4.2.1 | nl | ERR176549 | Other | lineage4.3.4.2 | None | SRR4035592 | Sensitive | lineage4.3.4.2.1 | za | SRR4035590 | Sensitive | lineage4.3.4.2.1 | za | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | SRR4035620 | Sensitive | lineage4.3.4.2.1 | za | ERR176489 | Sensitive | lineage4.3.4.2.1 | None | SRR4035571 | Sensitive | lineage4.3.4.2.1 | za | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | SRR4035628 | Sensitive | lineage4.3.4.2.1 | za | SRR4035616 | Sensitive | lineage4.3.4.2.1 | za | SRR4035570 | Sensitive | lineage4.3.4.2.1 | za | SRR4035568 | Sensitive | lineage4.3.4.2.1 | za | SRR4035608 | Sensitive | lineage4.3.4.2.1 | za | SRR4035625 | Sensitive | lineage4.3.4.2.1 | za | SRR4035653 | Sensitive | lineage4.3.4.2.1 | za | SRR4035613 | Sensitive | lineage4.3.4.2.1 | za | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR1633930 | Sensitive | lineage4.3.4.2.1 | za | ERR1633870 | Sensitive | lineage4.3.4.2.1 | za | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR2503410 | Sensitive | lineage4.3.4.2.1 | fi | ERR181761 | Sensitive | lineage4.3.4.2.1 | None | ERR181959 | Sensitive | lineage4.3.4.2.1 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR212162 | Sensitive | lineage4.3.4.2.1 | None | ERR221550 | Sensitive | lineage4.3.4.2.1 | None | ERR245769 | Sensitive | lineage4.3.4.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | ERR4817292 | Sensitive | lineage4.3.4.2.1 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR3675319 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR9224922 | MDR-TB | lineage4.3.4.2 | None | SRR25827776 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6045950 | Sensitive | lineage4.3.4.2.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | ERR13288807 | MDR-TB | lineage4.3.4.2.1 | None | ERR13288746 | RR-TB | lineage4.3.4.2.1 | None | ERR13286076 | Sensitive | lineage4.3.4.2.1 | None | ERR13288742 | Sensitive | lineage4.3.4.2 | None | ERR13286191 | RR-TB | lineage4.3.4.2.1 | None | ERR13289026 | MDR-TB | lineage4.3.4.2.1 | None | ERR2515432 | Sensitive | lineage4.3.4.2.1 | za | ERR9992904 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR2515399 | Sensitive | lineage4.3.4.2.1 | za | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | ERR2515266 | RR-TB | lineage4.3.4.2.1 | za | ERR2515917 | MDR-TB | lineage4.3.4.2.1 | za | ERR2515970 | Sensitive | lineage4.3.4.2.1 | za | ERR3287535 | MDR-TB | lineage4.3.4.2 | None | ERR8700406 | Sensitive | lineage4.3.4.2.1 | None | ERR8700405 | Sensitive | lineage4.3.4.2.1 | None | ERR8699847 | Sensitive | lineage4.3.4.2.1 | None | ERR4808946 | Sensitive | lineage4.3.4.2.1 | za | SRR10522783 | Sensitive | M.canetti | None | ERR13289060 | MDR-TB | lineage4.3.4.2.1 | None | SRR10522763 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | ERR313117 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR3597002 | Sensitive | M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR552304 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | ERR7361963 | Sensitive | lineage4.3.4.2.1 | None | SAMEA5569632 | MDR-TB | lineage4.3.4.2 | None | ERR8975078 | HR-TB | lineage4.3.4.2.1 | None | SRR22461591 | MDR-TB | lineage4.3.4.2 | None | SRR6650709 | Sensitive | M.canetti | None | SRR6896401 | Sensitive | lineage4.3.4.2.1 | None | ERR3275667 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446201 | Sensitive | lineage4.3.4.2 | nl | ERR2446496 | Sensitive | lineage4.3.4.2.1 | nl | ERR3275347 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446385 | Sensitive | lineage4.3.4.2 | nl | ERR2446440 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446543 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446349 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446102 | Sensitive | lineage4.3.4.2.1 | nl | ERR2446202 | Sensitive | lineage4.3.4.2.1 | nl | ERR3276179 | Sensitive | lineage4.3.4.2.1 | nl | ERR037513 | Sensitive | lineage4.3.4.2.1 | None | ERR3275219 | Sensitive | lineage4.3.4.2.1 | nl | ERR3275468 | Sensitive | lineage4.3.4.2.1 | nl | ERR126614 | Sensitive | lineage4.3.4.2.1 | None | ERR161022 | Sensitive | lineage4.3.4.2.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | SRR4035561 | Sensitive | lineage4.3.4.2.1 | za | SRR4035657 | Sensitive | lineage4.3.4.2.1 | za | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR4035663 | Sensitive | lineage4.3.4.2.1 | za | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | SRR4035618 | Sensitive | lineage4.3.4.2.1 | za | SRR4035624 | Sensitive | lineage4.3.4.2.1 | za | SRR4035666 | Sensitive | lineage4.3.4.2.1 | za | SRR4035586 | Sensitive | lineage4.3.4.2.1 | za | SRR4035614 | Sensitive | lineage4.3.4.2.1 | za | SRR4035560 | Sensitive | lineage4.3.4.2.1 | za | SRR4035575 | Sensitive | lineage4.3.4.2.1 | za | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR4035606 | Sensitive | lineage4.3.4.2.1 | za | SRR4035659 | Sensitive | lineage4.3.4.2.1 | za | SRR4035562 | Sensitive | lineage4.3.4.2.1 | za | SRR4035584 | Sensitive | lineage4.3.4.2.1 | za | ERR1633921 | Sensitive | lineage4.3.4.2.1 | za | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR1633855 | Sensitive | lineage4.3.4.2.1 | za | ERR1633959 | Sensitive | lineage4.3.4.2.1 | za | ERR1633850 | Sensitive | lineage4.3.4.2.1 | za | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR2652991 | Pre-XDR-TB | lineage4.3.4.2.1 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR216918 | Sensitive | lineage4.3.4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR323116 | Sensitive | lineage4.3.4.2.1 | None | ERR405201 | Sensitive | lineage4.3.4.2.1 | None | ERR405186 | Sensitive | lineage4.3.4.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR473361 | Sensitive | lineage4.3.4.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR323095 | Sensitive | lineage4.3.4.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02381010 | MDR-TB | lineage4.3.4.2.1 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SRR10851652 | Sensitive | lineage4.3.4.2 | None | SRR10851663 | Sensitive | lineage4.3.4.2 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR6045758 | Sensitive | lineage4.3.4.2.1 | gb | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | ERR3276149 | Other | lineage4.3.4.2 | nl | ERR13289025 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR13289030 | Sensitive | lineage4.3.4.2 | None | ERR9993041 | XDR-TB | lineage4.3.4.2.1 | None | ERR2516058 | Sensitive | lineage4.3.4.2.1 | za | ERR2515582 | Sensitive | lineage4.3.4.2.1 | za | ERR2515621 | Sensitive | lineage4.3.4.2.1 | za | ERR10748547 | MDR-TB | lineage4.3.4.2.1 | None | ERR4814041 | Sensitive | lineage4.3.4.2 | br | ERR4814092 | Sensitive | lineage4.3.4.2 | None | ERR4813791 | HR-TB | lineage4.3.4.2 | br | ERR3287828 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR3287358 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2184266 | MDR-TB | lineage4.3.4.2 | pe | ERR3287514 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR9125475 | Sensitive | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | SRR10869025 | Sensitive | lineage4.3.4.2.1 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | ERR1336822 | Sensitive | M.canetti | None |
|---|