lineage | Count |
---|---|
M.canetti | 54 |
lineage4.1.1.1 | 2 |
lineage4.8 | 19 |
La3;M.canetti | 11 |
lineage4.3.2 | 6 |
lineage3 | 5 |
lineage2.2.1 | 5 |
lineage4.7 | 1 |
lineage2.2.1;lineage3;lineage4.8 | 1 |
lineage1.2.1.2.1 | 2 |
lineage2.2.1;lineage3;lineage4 | 1 |
lineage2.2.1;lineage4.3.2 | 2 |
lineage4.1.2.1 | 1 |
lineage4.3.4.2.1 | 5 |
lineage4.3.1 | 2 |
La2;M.canetti | 1 |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage4.5 | 1 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 122 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR3597007 | Sensitive | M.canetti | None |
SRR16058674 | Other | M.canetti | None |
ERR9125475 | Other | M.canetti | None |
ERR4816019 | Sensitive | M.canetti | None |
ERR3275919 | Sensitive | lineage4.1.1.1 | nl |
SRR29274086 | RR-TB | lineage4.8 | None |
SRR10177258 | Other | M.canetti | None |
SRR5818661 | Other | M.canetti | dj |
ERR7451301 | Sensitive | M.canetti | None |
ERR1336821 | Sensitive | La3;M.canetti | None |
SRR10177260 | Other | M.canetti | None |
ERR266124 | Other | M.canetti | None |
ERR6865870 | Sensitive | lineage4.3.2 | None |
ERR1034710 | MDR-TB | lineage4.3.2 | pe |
SRR7070487 | Sensitive | lineage3 | None |
ERR1336823 | Sensitive | La3;M.canetti | None |
ERR313114 | Sensitive | M.canetti | None |
SRR24061599 | Sensitive | M.canetti | None |
SRR24061600 | Sensitive | M.canetti | None |
ERR266122 | Sensitive | La3;M.canetti | None |
SRR28868478 | Sensitive | lineage4.8 | None |
ERR4811324 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR11049378 | Sensitive | lineage4.7 | None |
SRR29440928 | Sensitive | lineage4.8 | None |
ERR266123 | Sensitive | M.canetti | None |
ERR3597001 | Sensitive | M.canetti | None |
SRR29441105 | Sensitive | lineage4.8 | None |
SRR25827359 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4.8 | None |
SRR16058668 | Sensitive | M.canetti | None |
SRR6650709 | Sensitive | M.canetti | None |
ERR6865872 | Sensitive | lineage4.3.2 | None |
ERR1336824 | Sensitive | La3;M.canetti | None |
ERR266110 | Other | M.canetti | None |
SRR29440861 | Sensitive | lineage4.8 | None |
SRR29440665 | Sensitive | lineage4.8 | None |
ERR313115 | Other | M.canetti | None |
SRR29440586 | Sensitive | lineage4.8 | None |
SRR29056248 | Sensitive | M.canetti | None |
SRR7070473 | Sensitive | lineage3 | None |
SRR18289196 | Sensitive | M.canetti | None |
SRR5818653 | Sensitive | M.canetti | dj |
ERR1336820 | Sensitive | La3;M.canetti | None |
SRR30182537 | Sensitive | lineage1.2.1.2.1 | None |
SRR29440668 | Sensitive | lineage4.8 | None |
SRR25827355 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None |
ERR4024678 | Sensitive | lineage4.3.2 | None |
ERR4024686 | Sensitive | lineage2.2.1;lineage4.3.2 | None |
SRR10177263 | Sensitive | M.canetti | None |
ERR552305 | Sensitive | M.canetti | None |
ERR2184432 | Sensitive | lineage4.8 | pe |
SRR5818676 | Other | M.canetti | dj |
SRR15316024 | Pre-XDR-TB | lineage2.2.1 | None |
SRR24061598 | Sensitive | M.canetti | None |
SRR29440913 | Sensitive | lineage4.8 | None |
ERR4829686 | Sensitive | lineage4.1.2.1 | it |
SRR28170812 | Sensitive | M.canetti | None |
SRR5818605 | Other | M.canetti | None |
ERR1367689 | Other | lineage4.3.4.2.1 | None |
SRR10177262 | Sensitive | M.canetti | None |
ERR1043163 | Other | La3;M.canetti | None |
ERR779900 | MDR-TB | lineage4.3.2 | pe |
ERR4817181 | Sensitive | M.canetti | None |
ERR3597003 | Sensitive | M.canetti | None |
SRR22179528 | Sensitive | M.canetti | None |
SRR6824292 | MDR-TB | lineage2.2.1 | cn |
ERR11050270 | Sensitive | lineage4.3.1 | None |
SRR25206925 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3597005 | Sensitive | M.canetti | None |
SRR1723546 | MDR-TB | lineage2.2.1 | None |
ERR266126 | Sensitive | La2;M.canetti | None |
ERR2514655 | Sensitive | lineage3 | None |
ERR313116 | Sensitive | M.canetti | None |
ERR4819927 | Sensitive | M.canetti | None |
ERR266125 | Other | La3;M.canetti | None |
ERR4821046 | Sensitive | M.canetti | None |
ERR552304 | Sensitive | M.canetti | None |
ERR2512445 | Sensitive | lineage3 | gb |
SRR5818567 | Other | M.canetti | dj |
ERR266107 | Other | M.canetti | None |
ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
ERR551055 | Sensitive | M.canetti | None |
ERR4829363 | Sensitive | lineage4.8 | None |
SRR21691151 | Sensitive | lineage4.1.1.1 | None |
SRR10177261 | Sensitive | M.canetti | None |
SRR10177259 | Other | M.canetti | None |
ERR3597002 | Other | M.canetti | None |
ERR1336825 | Sensitive | La3;M.canetti | None |
ERR3597006 | Other | La3;M.canetti | None |
ERR3132184 | Other | lineage4.3.4.2.1 | None |
SRR29440697 | Sensitive | lineage4.8 | None |
SRR29441064 | Sensitive | lineage4.8 | None |
ERR551057 | Other | M.canetti | None |
SRR5818652 | Sensitive | M.canetti | dj |
SRR25827362 | XDR-TB | lineage2.2.1;lineage3 | None |
ERR266109 | Sensitive | M.canetti | None |
SRR29604867 | Sensitive | lineage4.8 | None |
SRR29440671 | Sensitive | lineage4.8 | None |
ERR1367684 | Sensitive | lineage4.3.4.2.1 | None |
ERR4811154 | Sensitive | lineage4.5 | cn |
ERR1043164 | Other | La3;M.canetti | None |
ERR1336826 | Sensitive | La3;M.canetti | None |
ERR7911125 | RR-TB | lineage2.1 | vn |
SRR5818668 | Sensitive | M.canetti | dj |
SRR5818685 | Sensitive | M.canetti | None |
ERR1193853 | Other | lineage4.3.4.2.1 | cg |
ERR553306 | Other | lineage4.3.4.2.1 | cg |
ERR11049863 | Sensitive | lineage4.3.1 | None |
SRR29441096 | Sensitive | lineage4.8 | None |
SRR29440914 | Sensitive | lineage4.8 | None |
ERR4024674 | Sensitive | lineage4.3.2 | None |
SRR5818614 | Sensitive | M.canetti | dj |
ERR4815361 | Other | M.canetti | None |
ERR266108 | Sensitive | M.canetti | None |
SRR7068913 | Sensitive | lineage3 | None |
ERR313113 | Other | M.canetti | None |
ERR552307 | Sensitive | M.canetti | None |
SRR29441061 | Sensitive | lineage4.8 | None |
ERR266106 | Sensitive | M.canetti | None |
ERR9125480 | Sensitive | M.canetti | None |
ERR6865875 | Sensitive | lineage2.2.1;lineage4.3.2 | None |
SRR10808583 | Sensitive | lineage4.8 | None |
SRR6650400 | Sensitive | lineage1.2.1.2.1 | None |