lineage | Count |
---|---|
lineage4.3.2 | 6 |
lineage4.3.1 | 2 |
lineage4.3.2;lineage2.2.1 | 2 |
34 | |
lineage4.8 | 3 |
lineage4.4.1.1 | 1 |
lineage4;lineage3;lineage2.2.1 | 1 |
lineage2.2.1 | 4 |
lineage3;lineage2.2.1 | 1 |
lineage4.8;lineage3;lineage2.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.3.4.2.1 | 5 |
lineage3 | 2 |
lineage2.1 | 1 |
lineage4.5 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 68 |
ID | Drug resistance | Lineage | Country iso2 | ERR6865872 | Sensitive | lineage4.3.2 | None | ERR11049863 | Sensitive | lineage4.3.1 | None | ERR6865875 | Sensitive | lineage4.3.2;lineage2.2.1 | None | ERR6865870 | Sensitive | lineage4.3.2 | None | ERR11050270 | Sensitive | lineage4.3.1 | None | ERR7451300 | Sensitive | None | SRR10808583 | Sensitive | lineage4.8 | None | ERR736835 | HR-TB | None | ERR7451301 | Sensitive | None | ERR9125480 | Sensitive | None | SRR10272563 | RR-TB | lineage4.4.1.1 | None | SRR16058668 | Sensitive | None | SRR24061600 | Sensitive | None | SRR24061598 | Sensitive | None | SRR22179528 | Sensitive | None | SRR24061599 | Sensitive | None | SRR25827355 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None | SRR25206925 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827362 | XDR-TB | lineage3;lineage2.2.1 | None | SRR25827359 | Pre-XDR-TB | lineage4.8;lineage3;lineage2.2.1 | None | SRR1723546 | MDR-TB | lineage2.2.1 | None | ERR4815361 | Sensitive | None | ERR4817181 | Sensitive | None | SRR6824292 | MDR-TB | lineage2.2.1 | cn | ERR4816019 | Sensitive | None | ERR1034710 | MDR-TB | lineage4.3.2 | pe | SRR5818653 | Sensitive | dj | SRR5818567 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818661 | Sensitive | dj | ERR3275919 | Sensitive | lineage4.1.1.1 | nl | SRR5818676 | Sensitive | dj | SRR5818652 | Sensitive | dj | ERR2693230 | Other | None | ERR1193853 | Other | lineage4.3.4.2.1 | cg | ERR2514655 | Sensitive | lineage3 | None | ERR4819927 | Sensitive | None | ERR779900 | MDR-TB | lineage4.3.2 | pe | ERR2693231 | Other | None | ERR4821046 | Sensitive | None | ERR7911125 | RR-TB | lineage2.1 | vn | ERR553306 | Other | lineage4.3.4.2.1 | cg | SRR5818605 | Sensitive | None | ERR1367689 | Sensitive | lineage4.3.4.2.1 | None | SRR5818685 | Sensitive | None | ERR4829363 | Sensitive | lineage4.8 | None | ERR4811154 | Sensitive | lineage4.5 | cn | ERR4811324 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6650400 | Sensitive | lineage1.2.1.2.1 | None | ERR4829686 | Sensitive | lineage4.1.2.1 | it | ERR2184432 | Sensitive | lineage4.8 | pe | ERR11049378 | Sensitive | lineage4.7 | None | ERR3132184 | Sensitive | lineage4.3.4.2.1 | None | ERR1367684 | Sensitive | lineage4.3.4.2.1 | None | ERR2512445 | Sensitive | lineage3 | gb | ERR3597003 | Sensitive | None | ERR3283024 | Other | None | ERR3597006 | Sensitive | None | ERR3597005 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3797017 | Other | None | ERR3597007 | Sensitive | None | ERR3797044 | Other | None | ERR4024674 | Sensitive | lineage4.3.2 | None | ERR4024686 | Sensitive | lineage4.3.2;lineage2.2.1 | None | ERR4024678 | Sensitive | lineage4.3.2 | None |
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