Rv2764c - c.-58G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
94 Sensitive
2 RR-TB
1 HR-TB
4 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La2;M.canetti | 1 |
| lineage3 | 5 |
| M.canetti | 59 |
| lineage4.8 | 19 |
| lineage2.2.1;lineage3;lineage4.8 | 1 |
| lineage4.3.2 | 6 |
| La3;M.canetti | 9 |
| lineage1.2.1.2.1 | 2 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage2.2.1 | 5 |
| lineage4.5 | 1 |
| lineage4.3.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage2.2.1;lineage4.3.2 | 2 |
| lineage2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR266126 | Sensitive | La2;M.canetti | None | ERR2514655 | Sensitive | lineage3 | None | ERR266123 | Sensitive | M.canetti | None | SRR29441105 | Sensitive | lineage4.8 | None | SRR25827359 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4.8 | None | SRR5818567 | Other | M.canetti | dj | ERR4024674 | Sensitive | lineage4.3.2 | None | ERR266107 | Other | M.canetti | None | ERR9125475 | Sensitive | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | ERR313115 | Sensitive | M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | ERR266125 | Other | M.canetti | None | ERR266124 | Other | M.canetti | None | ERR4815361 | Other | M.canetti | None | ERR313113 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR3597002 | Sensitive | M.canetti | None | ERR3597006 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR551057 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | SRR16058668 | Sensitive | M.canetti | None | SRR16058674 | Sensitive | M.canetti | None | ERR6865872 | Sensitive | lineage4.3.2 | None | SRR29056248 | Sensitive | M.canetti | None | SRR5818685 | Sensitive | M.canetti | None | SRR10177259 | Other | M.canetti | None | SRR29440861 | Sensitive | lineage4.8 | None | SRR29441061 | Sensitive | lineage4.8 | None | ERR266106 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR5818653 | Sensitive | M.canetti | dj | ERR1336820 | Sensitive | La3;M.canetti | None | SRR30182537 | Sensitive | lineage1.2.1.2.1 | None | ERR266109 | Sensitive | M.canetti | None | SRR25827355 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | SRR29604867 | Sensitive | lineage4.8 | None | SRR5818676 | Other | M.canetti | dj | SRR10177260 | Other | M.canetti | None | SAMEA2534556 | Sensitive | M.canetti | None | ERR4811324 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811154 | Sensitive | lineage4.5 | cn | SRR7070487 | Sensitive | lineage3 | None | ERR11050270 | Sensitive | lineage4.3.1 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR553306 | Other | lineage4.3.4.2.1 | cg | ERR11049863 | Sensitive | lineage4.3.1 | None | SRR29440928 | Sensitive | lineage4.8 | None | SRR1723546 | MDR-TB | lineage2.2.1 | None | SRR29440914 | Sensitive | lineage4.8 | None | SRR22179528 | Sensitive | M.canetti | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR266110 | Other | M.canetti | None | ERR266108 | Sensitive | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | SRR29440665 | Sensitive | lineage4.8 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR3132184 | Other | lineage4.3.4.2.1 | None | SRR29440697 | Sensitive | lineage4.8 | None | SRR29441064 | Sensitive | lineage4.8 | None | SRR7070473 | Sensitive | lineage3 | None | SRR18289196 | Sensitive | M.canetti | None | SRR6650400 | Sensitive | lineage1.2.1.2.1 | None | SRR29440668 | Sensitive | lineage4.8 | None | ERR4024678 | Sensitive | lineage4.3.2 | None | ERR4024686 | Sensitive | lineage2.2.1;lineage4.3.2 | None | SRR10177258 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | ERR552305 | Sensitive | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | ERR1336821 | Sensitive | La3;M.canetti | None | ERR1367684 | Sensitive | lineage4.3.4.2.1 | None | SRR29440913 | Sensitive | lineage4.8 | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR6865870 | Sensitive | lineage4.3.2 | None | SAMEA6086630 | Sensitive | M.canetti | None | SAMEA2533665 | Sensitive | M.canetti | None | ERR2184432 | Sensitive | lineage4.8 | pe | ERR7911125 | RR-TB | lineage2.1 | vn | SRR5818668 | Sensitive | M.canetti | dj | ERR1193853 | Other | lineage4.3.4.2.1 | cg | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR1034710 | MDR-TB | lineage4.3.2 | pe | ERR266122 | Sensitive | La3;M.canetti | None | SRR29441096 | Sensitive | lineage4.8 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | ERR4829363 | Sensitive | lineage4.8 | None | SRR5818614 | Sensitive | M.canetti | dj | SRR21691151 | Sensitive | lineage4.1.1.1 | None | ERR552307 | Sensitive | M.canetti | None | ERR552304 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | ERR3275919 | Sensitive | lineage4.1.1.1 | nl | SRR7068913 | Sensitive | lineage3 | None | SRR29440586 | Sensitive | lineage4.8 | None | ERR6865875 | Sensitive | lineage2.2.1;lineage4.3.2 | None | SRR10808583 | Sensitive | lineage4.8 | None | SRR25827362 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4816019 | Sensitive | M.canetti | None | SRR29274086 | RR-TB | lineage4.8 | None | SRR10177263 | Sensitive | M.canetti | None | SRR29440671 | Sensitive | lineage4.8 | None | SRR15316024 | Pre-XDR-TB | lineage2.2.1 | None | ERR1367689 | Other | lineage4.3.4.2.1 | None | SRR10177262 | Sensitive | M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | ERR4829686 | Sensitive | lineage4.1.2.1 | it | ERR779900 | MDR-TB | lineage4.3.2 | pe | ERR3597003 | Sensitive | M.canetti | None | ERR2512445 | Sensitive | lineage3 | gb | SRR6824292 | MDR-TB | lineage2.2.1 | cn | SRR25206925 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868478 | Sensitive | lineage4.8 | None | ERR11049378 | Sensitive | lineage4.7 | None | ERR3597005 | Sensitive | M.canetti | None |
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