lineage | Count |
---|---|
lineage4.1.3 | 2 |
lineage4.9 | 10 |
6 | |
lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
M.canetti;lineage2.1;lineage4.9 | 3 |
La3;lineage4.9 | 1 |
lineage4.1.2.1 | 3 |
M.canetti | 3 |
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage2.2.1 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
lineage2.1;lineage2.2;lineage6.3 | 1 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage4.8;lineage4.9 | 1 |
La2;M.canetti | 1 |
lineage6.1.3 | 1 |
lineage6.3.1 | 1 |
lineage2.1;lineage6.3 | 1 |
lineage4 | 2 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2.1;lineage4.9 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR9786611 | HR-TB | lineage4.1.3 | None |
SRR28119752 | Other | lineage4.9 | None |
SRR7496472 | Other | lineage4.9 | None |
ERR9786843 | Other | None | |
ERR9787197 | Other | None | |
SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None |
ERR9786671 | Other | None | |
ERR9786604 | Other | None | |
SRR3675457 | Other | lineage4.9 | None |
SRR6046878 | Other | lineage4.9 | None |
ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None |
ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
SRR26399973 | Other | La3;lineage4.9 | None |
ERR9786682 | Other | lineage4.1.2.1 | None |
ERR266125 | Other | M.canetti | None |
SRR6046046 | Other | lineage4.9 | None |
ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
SRR6045347 | Other | lineage4.9 | None |
SRR6046593 | Other | lineage4.9 | None |
SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None |
SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
SRR6458423 | HR-TB | lineage2.2.1 | None |
SRR3675236 | Other | None | |
SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None |
ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None |
ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
ERR9786642 | Other | lineage4.1.2.1 | None |
SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
SRR1640750 | Other | None | |
ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
SRR3675465 | Other | lineage4.9;lineage6.3 | None |
SRR29096541 | Other | lineage4.9 | None |
ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None |
ERR266126 | Sensitive | La2;M.canetti | None |
ERR9786694 | Other | lineage4.1.2.1 | None |
ERR9787165 | Other | lineage6.1.3 | None |
ERR266123 | Sensitive | M.canetti | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR9787139 | Other | lineage6.3.1 | None |
SRR19303884 | Other | lineage2.1;lineage6.3 | None |
SRR6045053 | Other | lineage4 | None |
ERR3597006 | Sensitive | M.canetti | None |
SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None |
SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
ERR2027263 | Other | lineage4 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
ERR3804169 | HR-TB | lineage4.1.3 | None |