Rv3245c - c.153A>G
Drug resistance types
17 Sensitive
12 RR-TB
15 HR-TB
30 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| 1 | |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti | 11 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti | 67 |
| lineage4.9 | 23 |
| lineage3 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La2;M.canetti | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR987722 | MDR-TB | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR266109 | Other | M.canetti | None | ERR266107 | Other | M.canetti | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3597001 | Other | M.canetti | None | SRR13837960 | RR-TB | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4815361 | Other | M.canetti | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR13837582 | RR-TB | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR551055 | Other | M.canetti | None | ERR552307 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | ERR3597002 | Other | M.canetti | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR313116 | Other | M.canetti | None | SRR5818614 | Other | M.canetti | dj | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR266121 | Other | M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | SRR10177263 | Other | M.canetti | None | ERR4816019 | Other | M.canetti | None | ERR3597007 | Other | M.canetti | None | SRR13837584 | RR-TB | lineage4.9 | None | ERR552306 | Other | M.canetti;lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR10177262 | Other | M.canetti | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR24061598 | Other | M.canetti | None | ERR266122 | Other | La3;M.canetti | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4816656 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR13861143 | RR-TB | lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | ERR266124 | Other | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR551179 | Sensitive | M.canetti | None | SRR22179528 | Other | M.canetti | None | SRR28170812 | Other | M.canetti | None | SRR18289196 | Other | M.canetti | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR24061600 | Other | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR16058668 | Other | M.canetti | None | ERR552304 | Other | M.canetti | None | SRR13837581 | RR-TB | lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | SRR13861146 | RR-TB | lineage4.9 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4819927 | Other | M.canetti | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | SRR5818652 | Other | M.canetti | dj | SRR13837473 | RR-TB | lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR266120 | Other | M.canetti | None | ERR9125480 | Other | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR13837583 | RR-TB | lineage4.9 | None | SRR5818653 | Other | M.canetti | dj | ERR4817181 | Other | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR10177258 | Other | M.canetti | None | ERR551056 | Other | M.canetti | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6650709 | Other | M.canetti | None | SRR10177260 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR10177261 | Other | M.canetti | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR18289195 | Sensitive | M.canetti | None | ERR3597004 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | ERR266106 | Other | M.canetti | None | ERR3597003 | Other | M.canetti | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR5818567 | Other | M.canetti | dj | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR266123 | Other | M.canetti | None | ERR3597005 | Other | M.canetti | None | ERR266110 | Other | M.canetti | None | ERR266126 | Other | La2;M.canetti | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4821046 | Other | M.canetti | None | SRR5818668 | Other | M.canetti | dj | SRR13837683 | Sensitive | lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | SRR24061599 | Other | M.canetti | None | ERR313115 | Other | M.canetti | None | ERR551057 | Other | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR13837961 | RR-TB | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR552305 | Other | M.canetti | None | ERR551182 | Sensitive | M.canetti | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR313114 | Other | M.canetti | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR5818685 | Other | M.canetti | None | SRR13837474 | RR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR5818661 | Other | M.canetti | dj | SRR13861649 | Other | lineage4.9 | None | SRR5818676 | Other | M.canetti | dj | ERR7451301 | Other | M.canetti | None | ERR266108 | Other | M.canetti | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
|---|
