Rv3795 - c.1077A>G
Drug resistance types
77 Sensitive
6 RR-TB
36 HR-TB
16 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 65 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4 | 2 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 43 |
| La3;M.canetti | 11 |
| lineage3.1.1 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1;lineage4.9 | 3 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 9 |
| lineage2.2.1.2 | 2 |
| La1.7;M.canetti;lineage4.9 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 2 | |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage3 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10522763 | Sensitive | M.canetti | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5818614 | Sensitive | M.canetti | dj | SRR6045053 | Other | lineage4 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR10177261 | Sensitive | M.canetti | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR10522783 | Sensitive | M.canetti | None | ERR313113 | Other | M.canetti | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR313115 | Other | M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR9125480 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR12882757 | Sensitive | lineage3.1.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR18289196 | Sensitive | M.canetti | None | SRR5818405 | Other | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR7451300 | Sensitive | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR6866639 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR1336821 | Sensitive | La3;M.canetti | None | ERR4769452 | Other | lineage4.9 | None | SRR10177260 | Other | M.canetti | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR13265833 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR4817181 | Sensitive | M.canetti | None | ERR3597003 | Sensitive | M.canetti | None | SRR22179528 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR266121 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR266123 | Sensitive | M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR1336822 | Sensitive | M.canetti | None | SRR3675270 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | ERR266107 | Other | M.canetti | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4815361 | Other | M.canetti | None | SRR6046046 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818385 | Other | lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR266110 | Other | M.canetti | None | ERR4798099 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR3597002 | Other | M.canetti | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR551057 | Other | M.canetti | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5818652 | Sensitive | M.canetti | dj | SRR5818653 | Sensitive | M.canetti | dj | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR5818676 | Other | M.canetti | dj | SRR24061598 | Sensitive | M.canetti | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR266124 | Other | M.canetti | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR29096225 | Sensitive | lineage4.9 | None | SRR10177262 | Sensitive | M.canetti | None | ERR987722 | MDR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR3597005 | Sensitive | M.canetti | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4819927 | Sensitive | M.canetti | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR552304 | Sensitive | M.canetti | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3597004 | Sensitive | M.canetti | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR16058668 | Sensitive | M.canetti | None | SRR5535933 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6650709 | Sensitive | M.canetti | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR551056 | Sensitive | M.canetti | None | ERR266108 | Sensitive | M.canetti | None | SRR1181251 | Other | lineage2.2.1 | None | SRR10177259 | Other | M.canetti | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR552307 | Sensitive | M.canetti | None | SRR12882627 | Sensitive | lineage3.1.1 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR266106 | Sensitive | M.canetti | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR29096527 | Sensitive | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR266120 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | ERR3799304 | Other | lineage6.1.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | SRR6046878 | Other | lineage4.9 | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR3283042 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR551179 | Sensitive | M.canetti | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR266125 | Other | La3;M.canetti | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4821046 | Sensitive | M.canetti | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5818567 | Other | M.canetti | dj |
|---|
