Rv1854c - c.405A>G
Drug resistance types
36 Sensitive
1 RR-TB
79 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| 81 | |
| lineage2.2.1 | 4 |
| lineage2.2 | 2 |
| lineage4.9 | 11 |
| lineage4.5 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1 | 1 |
| lineage4.8 | 4 |
| lineage4 | 27 |
| lineage3.1.2 | 3 |
| lineage4.1.2.1 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| La1.8.1 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR987722 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13837519 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR16103891 | Sensitive | lineage4.4.2 | None | SRR3675482 | HR-TB | None | SRR1640750 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR3675502 | Other | None | ERR176740 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR1949956 | Sensitive | lineage4.8 | None | SRR3675558 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR212121 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229171 | Sensitive | lineage4 | None | ERR2229371 | Sensitive | lineage4.8 | None | ERR2229802 | Sensitive | lineage4.8 | None | ERR2229497 | Sensitive | lineage4.8 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR2100883 | HR-TB | lineage3.1.2 | None | SRR5341418 | Other | None | SRR6045503 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | ERR2693254 | Other | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693257 | Other | None | ERR4821655 | Sensitive | lineage4 | None | ERR278594 | HR-TB | None | ERR270783 | HR-TB | lineage3.1.2 | None | SRR6045399 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831117 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311081 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR1034652 | Other | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067681 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3439432 | Other | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR3597006 | Sensitive | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797044 | Other | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736835 | HR-TB | None |
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