Rv0006 - c.2415T>C
Drug resistance types
62 Sensitive
1 RR-TB
35 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La2;M.canetti | 1 |
| M.canetti | 65 |
| La3;lineage4.9 | 1 |
| lineage4.9 | 27 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| 2 | |
| lineage2.1;lineage4.9 | 4 |
| La1.7;lineage4.9;lineage7 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti | 3 |
| lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 156 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR552304 | Sensitive | M.canetti | None | ERR1063896 | Sensitive | None | ERR3597004 | Sensitive | M.canetti | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR266110 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR313115 | Other | M.canetti | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3597006 | Other | La3;M.canetti | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR551181 | Sensitive | M.canetti | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR10177263 | Sensitive | M.canetti | None | SRR5818661 | Other | M.canetti | dj | ERR7451301 | Sensitive | M.canetti | None | SRR5818676 | Other | M.canetti | dj | ERR1034634 | HR-TB | lineage4.9 | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR4817181 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR266121 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR266123 | Sensitive | M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR736872 | HR-TB | lineage4.9 | None | ERR1336822 | Sensitive | M.canetti | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR5818567 | Other | M.canetti | dj | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR16058668 | Sensitive | M.canetti | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR266107 | Other | M.canetti | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR313113 | Other | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR502510 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR551057 | Other | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR18289195 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR5818653 | Sensitive | M.canetti | dj | ERR3283021 | HR-TB | lineage4.9 | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | SRR5341453 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR10177258 | Other | M.canetti | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR552305 | Sensitive | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR551182 | Sensitive | M.canetti | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR551180 | Sensitive | M.canetti | None | SRR10177262 | Sensitive | M.canetti | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3597003 | Sensitive | M.canetti | None | SRR22179528 | Sensitive | M.canetti | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR137286 | Other | lineage4.9 | None | ERR266125 | Other | La3;M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR10522763 | Sensitive | M.canetti | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR551055 | Sensitive | M.canetti | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5818614 | Sensitive | M.canetti | dj | ERR4815361 | Other | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR10177261 | Sensitive | M.canetti | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR266108 | Sensitive | M.canetti | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | ERR266106 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR10177260 | Other | M.canetti | None | ERR779852 | Sensitive | lineage4.9 | None | ERR266124 | Other | M.canetti | None | SRR20970016 | Other | lineage2.2 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj |
|---|
