Rv0001 - c.549C>T
Drug resistance types
10 Sensitive
2 RR-TB
8 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 2 |
| La3;M.canetti | 10 |
| lineage4.4.2 | 1 |
| M.canetti;lineage2.2 | 1 |
| M.canetti | 2 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La2;M.canetti | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR067712 | Sensitive | lineage4.9 | None |
| ERR2229143 | RR-TB | lineage4.9 | None |
| ERR1336821 | Sensitive | La3;M.canetti | None |
| SRR25515329 | Sensitive | lineage4.4.2 | None |
| ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None |
| ERR1336825 | Sensitive | La3;M.canetti | None |
| ERR266124 | Other | M.canetti | None |
| ERR1043164 | Other | La3;M.canetti | None |
| ERR1336826 | Sensitive | La3;M.canetti | None |
| SRR1173453 | Other | lineage4.4.1.1 | None |
| SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None |
| SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
| ERR266126 | Sensitive | La2;M.canetti | None |
| ERR266123 | Sensitive | M.canetti | None |
| ERR266125 | Other | La3;M.canetti | None |
| ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None |
| ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None |
| ERR3597006 | Other | La3;M.canetti | None |
| SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None |
| ERR1336820 | Sensitive | La3;M.canetti | None |
| SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
| SRR1180172 | Other | lineage2.2.1 | None |
| ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR1043163 | Other | La3;M.canetti | None |
| ERR1336823 | Sensitive | La3;M.canetti | None |
| SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
| ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None |
| SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR4821053 | RR-TB | lineage3 | None |
| ERR1336824 | Sensitive | La3;M.canetti | None |
