Rv0001 - c.549C>T
Drug resistance types
8 Sensitive
3 RR-TB
1 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti | 10 |
| M.canetti | 2 |
| lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage1.1.2;lineage4 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| La2;M.canetti | 1 |
| M.canetti;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1043163 | Other | La3;M.canetti | None | ERR266124 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR266126 | Other | La2;M.canetti | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR3597006 | Other | La3;M.canetti | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR266125 | Other | La3;M.canetti | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR25515329 | Sensitive | lineage4.4.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4821053 | RR-TB | lineage3 | None | ERR266123 | Other | M.canetti | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None |
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