Rv3696c - c.336T>C


Drug resistance types
18 Sensitive 4 RR-TB 23 HR-TB 15 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 91 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 2
lineage4.1.2.1 5
M.canetti 65
lineage4.9 18
lineage4.1.3 2
lineage2.2.1 1
La1.7;lineage4.9 7
M.canetti;lineage4.9 3
La3;M.canetti 11
La3;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
La1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.6.2.2 1
lineage4.1.1.1 1
lineage2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7;lineage3.1;lineage4 1
lineage1;lineage4.9 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 2
La1.7 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
1
La1.2.BCG 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
La2;M.canetti 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 152
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR9125480 Other M.canetti None
ERR313115 Other M.canetti None
SRR3675461 RR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR551057 Other M.canetti None
ERR313117 Other M.canetti None
ERR4816019 Other M.canetti None
ERR3597007 Other M.canetti None
SRR7496472 Other lineage4.9 None
SRR5818653 Other M.canetti dj
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
ERR9786421 Other lineage4.1.2.1 None
ERR313114 Other M.canetti None
SRR24061598 Other M.canetti None
ERR551056 Other M.canetti None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1336826 Sensitive La3;M.canetti None
ERR9786682 Other lineage4.1.2.1 None
ERR551179 Sensitive M.canetti None
ERR971389 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR18289195 Sensitive M.canetti None
SRR18289196 Other M.canetti None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR1336821 Sensitive La3;M.canetti None
ERR4798099 HR-TB lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR10177259 Other M.canetti None
SRR5818652 Other M.canetti dj
ERR3597002 Other M.canetti None
ERR181887 Other lineage4.9 None
ERR313116 Other M.canetti None
ERR266120 Other M.canetti None
SRR24061597 Sensitive M.canetti None
ERR1336825 Sensitive La3;M.canetti None
ERR266121 Other M.canetti None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3597006 Other La3;M.canetti None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR10177263 Other M.canetti None
SRR15014655 Other M.canetti;lineage1 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR552306 Other M.canetti;lineage4.9 None
ERR4817181 Other M.canetti None
ERR551180 Sensitive M.canetti None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1336822 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR1336820 Sensitive La3;M.canetti None
ERR9125475 Other M.canetti None
SRR5818661 Other M.canetti dj
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
ERR1043163 Other La3;M.canetti None
SRR10808730 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR22179528 Other M.canetti None
SRR28170812 Other M.canetti None
ERR266125 Other La3;M.canetti None
ERR266106 Other M.canetti None
ERR3597003 Other M.canetti None
ERR4810624 MDR-TB lineage2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR5818567 Other M.canetti dj
SRR24061600 Other M.canetti None
ERR266107 Other M.canetti None
ERR3597001 Other M.canetti None
SRR16058668 Other M.canetti None
ERR1336824 Sensitive La3;M.canetti None
ERR552307 Other M.canetti None
SRR5818668 Other M.canetti dj
ERR4769521 RR-TB lineage4.9 None
SRR5818614 Other M.canetti dj
SRR24061599 Other M.canetti None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1063849 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR552305 Other M.canetti None
ERR551182 Sensitive M.canetti None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR10177262 Other M.canetti None
ERR1063858 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR4830353 HR-TB La1.7 None
ERR266122 Other La3;M.canetti None
ERR9786611 HR-TB lineage4.1.3 None
SRR10177258 Other M.canetti None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786694 Other lineage4.1.2.1 None
SRR9970978 Other La1;lineage4.1.2 None
SRR5818676 Other M.canetti dj
SRR6650709 Other M.canetti None
ERR266108 Other M.canetti None
SRR10177260 Other M.canetti None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR266124 Other M.canetti None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR1043164 Other La3;M.canetti None
SRR5818605 Other M.canetti None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR10177261 Other M.canetti None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR3597004 Sensitive M.canetti None
SRR3675441 RR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR176651 Other lineage4.9 None
SRR10522763 Sensitive M.canetti None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR266109 Other M.canetti None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR266123 Other M.canetti None
ERR4815361 Other M.canetti None
ERR552304 Other M.canetti None
ERR926165 Other lineage4.9 None
ERR3597005 Other M.canetti None
ERR266110 Other M.canetti None
ERR551055 Other M.canetti None
ERR266126 Other La2;M.canetti None
SRR5341300 HR-TB lineage4.9 None
ERR4819927 Other M.canetti None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR10522783 Sensitive M.canetti None
ERR4821046 Other M.canetti None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR313113 Other M.canetti None