Rv0635 - c.-78A>G


Drug resistance types
17 Sensitive 9 RR-TB 55 HR-TB 45 MDR-TB 1 Pre-XDR-TB 3 XDR-TB 121 Other
lineage Counts
lineage Count
lineage3.1;lineage9 1
lineage4.9 33
La3;M.canetti 11
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti 67
lineage2.1;lineage4.9;lineage6.3 9
La1.6;La3;M.canetti;lineage4.2.2 1
La3;lineage1.1.2 1
lineage2.1 1
La1.7;lineage4.9;lineage7 2
La2;lineage4.9 2
lineage4.9;lineage6.3 6
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.9 4
lineage4.9;lineage9 3
lineage2.1;lineage4.9 8
lineage3.1.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.7;M.canetti;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage6.3 2
lineage2.2.1.1 3
M.canetti;lineage2.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;lineage4.9 5
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1 2
M.canetti;lineage4.2 1
La1.7;lineage4.9 3
10
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.2.BCG 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage3 2
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7;lineage4.3.4.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.9;lineage9 1
lineage4 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2 1
La2;M.canetti 1
La1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7.1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3 1
La3;lineage2.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 251
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR1196583 Other lineage4.9 None
ERR1336821 Sensitive La3;M.canetti None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR5818567 Other M.canetti dj
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4818929 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4815361 Other M.canetti None
ERR552304 Other M.canetti None
ERR4820773 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3597005 Other M.canetti None
SRR1172310 MDR-TB lineage4.9 None
ERR1336824 Sensitive La3;M.canetti None
SRR1180226 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4819927 Other M.canetti None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR10177259 Other M.canetti None
SRR10522783 Sensitive M.canetti None
ERR4821046 Other M.canetti None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR5818652 Other M.canetti dj
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3597002 Other M.canetti None
SRR5818668 Other M.canetti dj
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR551057 Other M.canetti None
ERR1063849 HR-TB lineage4.9 None
ERR3597007 Other M.canetti None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR552306 Other M.canetti;lineage4.9 None
SRR10177262 Other M.canetti None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4817181 Other M.canetti None
ERR551180 Sensitive M.canetti None
ERR551181 Sensitive M.canetti None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR16058674 Other M.canetti None
ERR108471 HR-TB lineage4.9 None
ERR1336820 Sensitive La3;M.canetti None
ERR176751 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR266122 Other La3;M.canetti None
ERR4816656 Other lineage4.9 None
SRR10177258 Other M.canetti None
SRR5818661 Other M.canetti dj
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5818676 Other M.canetti dj
ERR1043163 Other La3;M.canetti None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1180172 RR-TB lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR551179 Sensitive M.canetti None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR22179528 Other M.canetti None
SRR28170812 Other M.canetti None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR25827682 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266109 Other M.canetti None
ERR266107 Other M.canetti None
ERR3597001 Other M.canetti None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
ERR266123 Other M.canetti None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR551055 Other M.canetti None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR552307 Other M.canetti None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR313116 Other M.canetti None
ERR266120 Other M.canetti None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR24061597 Sensitive M.canetti None
ERR9125480 Other M.canetti None
ERR1336825 Sensitive La3;M.canetti None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3597006 Other La3;M.canetti None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR1336822 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR5818685 Other M.canetti None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR24061598 Other M.canetti None
ERR551056 Other M.canetti None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6650709 Other M.canetti None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR266124 Other M.canetti None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR1043164 Other La3;M.canetti None
SRR5818605 Other M.canetti None
ERR1336826 Sensitive La3;M.canetti None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR7451300 Sensitive M.canetti None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR1184372 MDR-TB None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
SRR1196768 MDR-TB None
ERR3597004 Sensitive M.canetti None
ERR266125 Other La3;M.canetti None
ERR266106 Other M.canetti None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR3597003 Other M.canetti None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR24061600 Other M.canetti None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR10522763 Sensitive M.canetti None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR16058668 Other M.canetti None
SRR20969708 HR-TB lineage2.2 None
SRR1167384 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR266110 Other M.canetti None
ERR266126 Other La2;M.canetti None
ERR313113 Other M.canetti None
SRR23961542 Other La1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6046593 Other lineage4.9 None
SRR5818614 Other M.canetti dj
SRR24061599 Other M.canetti None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR313115 Other M.canetti None
ERR266121 Other M.canetti None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR10177263 Other M.canetti None
ERR313117 Other M.canetti None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR5818653 Other M.canetti dj
ERR4815441 HR-TB lineage4.9 None
ERR552305 Other M.canetti None
ERR551182 Sensitive M.canetti None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR1184294 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR313114 Other M.canetti None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR9125475 Other M.canetti None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR7451301 Other M.canetti None
ERR266108 Other M.canetti None
SRR1172817 Other La3 None
SRR10177260 Other M.canetti None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
SRR10177261 Other M.canetti None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR18289195 Sensitive M.canetti None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9117709 Other None
ERR212001 HR-TB None
SRR18289196 Other M.canetti None
ERR4816999 Other None