Rv0486 - p.Val313Ala
Drug resistance types
19 Sensitive
1 RR-TB
18 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 2 |
| lineage2.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti | 11 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti | 10 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 9 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La2;M.canetti | 1 |
| La3;lineage4.8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814352 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR266121 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR10522763 | Sensitive | M.canetti | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR10522783 | Sensitive | M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1043163 | Other | La3;M.canetti | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR1336822 | Sensitive | M.canetti | None | ERR3597004 | Sensitive | M.canetti | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR4800341 | Other | lineage3 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1043164 | Other | La3;M.canetti | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR18289195 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
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