Rv3794 - c.1080T>G


Drug resistance types
55 Sensitive 4 RR-TB 37 HR-TB 28 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 39 Other
lineage Counts
lineage Count
La3;M.canetti 11
lineage2.1;lineage4.9;lineage6.3 1
M.canetti 64
M.canetti;lineage2.1;lineage4 1
lineage4.9 9
M.canetti;lineage4.9 4
lineage2.1;lineage4.9 5
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 21
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
M.canetti;lineage2.1 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La2;M.canetti 1
spoligotype Counts
spoligotype Count
None 163
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR266125 Other La3;M.canetti None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3597001 Sensitive M.canetti None
ERR552304 Sensitive M.canetti None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR5818567 Other M.canetti dj
ERR266107 Other M.canetti None
ERR5162090 RR-TB lineage4.9 None
SRR5818614 Sensitive M.canetti dj
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR551056 Sensitive M.canetti None
ERR266108 Sensitive M.canetti None
ERR3597002 Other M.canetti None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR1336825 Sensitive La3;M.canetti None
ERR3597006 Other La3;M.canetti None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR9125480 Sensitive M.canetti None
ERR313117 Other M.canetti None
ERR4815441 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR5818652 Sensitive M.canetti dj
SRR5818653 Sensitive M.canetti dj
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3597007 Sensitive M.canetti None
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
ERR1336820 Sensitive La3;M.canetti None
ERR4819877 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266109 Sensitive M.canetti None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5818661 Other M.canetti dj
ERR552305 Sensitive M.canetti None
ERR7451301 Sensitive M.canetti None
ERR1336821 Sensitive La3;M.canetti None
ERR551182 Sensitive M.canetti None
ERR552306 Sensitive M.canetti;lineage4.9 None
SRR10177260 Other M.canetti None
ERR266124 Other M.canetti None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR28170812 Sensitive M.canetti None
SRR5818605 Other M.canetti None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6044815 Other lineage4.9 None
ERR1336823 Sensitive La3;M.canetti None
ERR4819422 HR-TB lineage4.9 None
ERR266121 Sensitive M.canetti None
SRR24061599 Sensitive M.canetti None
SRR24061600 Sensitive M.canetti None
ERR266122 Sensitive La3;M.canetti None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3597005 Sensitive M.canetti None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266123 Sensitive M.canetti None
ERR313116 Sensitive M.canetti None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4821046 Sensitive M.canetti None
ERR3597004 Sensitive M.canetti None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10522763 Sensitive M.canetti None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR16058668 Sensitive M.canetti None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR4815361 Other M.canetti None
ERR4820773 HR-TB lineage4.9 None
SRR10177261 Sensitive M.canetti None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR10177259 Other M.canetti None
ERR313113 Other M.canetti None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR313115 Other M.canetti None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266106 Sensitive M.canetti None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR266120 Sensitive M.canetti None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9125475 Other M.canetti None
ERR4817731 HR-TB lineage4.9 None
ERR4816019 Sensitive M.canetti None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR1336826 Sensitive La3;M.canetti None
ERR551180 Sensitive M.canetti None
ERR9786843 Other None
SRR10177262 Sensitive M.canetti None
ERR1043163 Other La3;M.canetti None
ERR234659 Other None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR313114 Sensitive M.canetti None
SRR5818668 Sensitive M.canetti dj
SRR5818685 Sensitive M.canetti None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819927 Sensitive M.canetti None
ERR551179 Sensitive M.canetti None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1336822 Sensitive M.canetti None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR551055 Sensitive M.canetti None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6650709 Sensitive M.canetti None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR1336824 Sensitive La3;M.canetti None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR266110 Other M.canetti None
SRR10522783 Sensitive M.canetti None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR552307 Sensitive M.canetti None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR551057 Other M.canetti None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR18289196 Sensitive M.canetti None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR10177258 Other M.canetti None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5818676 Other M.canetti dj
SRR24061598 Sensitive M.canetti None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1043164 Other La3;M.canetti None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817181 Sensitive M.canetti None
ERR3597003 Sensitive M.canetti None
SRR22179528 Sensitive M.canetti None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR266126 Sensitive La2;M.canetti None