Rv1854c - c.1266C>G


Drug resistance types
59 Sensitive 2 RR-TB 40 HR-TB 11 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 74 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 2
M.canetti 68
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 2
lineage2.1;lineage4.9 7
M.canetti;lineage2.1;lineage4.9 6
lineage4.6.2.2 1
lineage4.9 12
La3;M.canetti 11
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 5
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 4
lineage3.1;lineage9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.2 1
M.canetti;lineage4.9 2
lineage4 1
6
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.2.BCG 1
lineage2.2.1 3
M.canetti;lineage2.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La2;M.canetti 1
lineage4.8 1
La3;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
lineage4.1.3 2
M.canetti;lineage4.2 1
lineage4.1.2.1 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 189
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR552305 Sensitive M.canetti None
ERR7451301 Sensitive M.canetti None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR551182 Sensitive M.canetti None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR5818605 Other M.canetti None
SRR1184294 Other lineage4.9 None
ERR1336826 Sensitive La3;M.canetti None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4817181 Sensitive M.canetti None
SRR12142341 HR-TB lineage2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR266122 Sensitive La3;M.canetti None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR313116 Sensitive M.canetti None
ERR4819927 Sensitive M.canetti None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR266125 Other La3;M.canetti None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR552304 Sensitive M.canetti None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR16058668 Sensitive M.canetti None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR551055 Sensitive M.canetti None
SRR5818614 Sensitive M.canetti dj
ERR4815361 Other M.canetti None
SRR6650709 Sensitive M.canetti None
SRR10177261 Sensitive M.canetti None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816585 Other lineage2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3597002 Other M.canetti None
ERR552307 Sensitive M.canetti None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR313115 Other M.canetti None
ERR4816999 Other None
ERR3597006 Other La3;M.canetti None
ERR313117 Other M.canetti None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR18289195 Sensitive M.canetti None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR551181 Sensitive M.canetti None
SRR1165699 Other lineage4.9 None
ERR1336820 Sensitive La3;M.canetti None
SRR1172728 RR-TB La3 None
ERR176751 Other lineage4.9 None
SRR5818676 Other M.canetti dj
SRR10177260 Other M.canetti None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR502912 Other lineage2.2.1 None
ERR551180 Sensitive M.canetti None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1043163 Other La3;M.canetti None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR22179528 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
ERR313114 Sensitive M.canetti None
ERR266121 Sensitive M.canetti None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR24061599 Sensitive M.canetti None
SRR24061600 Sensitive M.canetti None
ERR266126 Sensitive La2;M.canetti None
SRR1196583 Other lineage4.9 None
ERR3597001 Sensitive M.canetti None
ERR1336822 Sensitive M.canetti None
ERR4821046 Sensitive M.canetti None
ERR3597004 Sensitive M.canetti None
SRR5818567 Other M.canetti dj
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR10522763 Sensitive M.canetti None
ERR4817735 Other lineage4.8 None
ERR266107 Other M.canetti None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1336824 Sensitive La3;M.canetti None
ERR551056 Sensitive M.canetti None
ERR266110 Other M.canetti None
ERR266108 Sensitive M.canetti None
ERR313113 Other M.canetti None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR266106 Sensitive M.canetti None
ERR9125480 Sensitive M.canetti None
SRR29056248 Sensitive M.canetti None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR18289196 Sensitive M.canetti None
SRR5818652 Sensitive M.canetti dj
SRR5818653 Sensitive M.canetti dj
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR7535086 Other None
ERR9125475 Other M.canetti None
ERR4816019 Sensitive M.canetti None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR10177263 Sensitive M.canetti None
ERR9786611 HR-TB lineage4.1.3 None
SRR10177258 Other M.canetti None
SRR5818661 Other M.canetti dj
SRR1172817 Other La3 None
SRR1172234 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR24061598 Sensitive M.canetti None
ERR1336821 Sensitive La3;M.canetti None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR266124 Other M.canetti None
ERR1043164 Other La3;M.canetti None
SRR28170812 Sensitive M.canetti None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR10177262 Sensitive M.canetti None
ERR212001 HR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3597003 Sensitive M.canetti None
ERR4819781 Other lineage2.2.1 None
SRR5818668 Sensitive M.canetti dj
SRR5818685 Sensitive M.canetti None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR24061597 Sensitive M.canetti None
ERR3597005 Sensitive M.canetti None
ERR266123 Sensitive M.canetti None
SRR1173778 Other lineage4.9 None
ERR551179 Sensitive M.canetti None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR387051 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196494 MDR-TB None
SRR10177259 Other M.canetti None
SRR10522783 Sensitive M.canetti None
SRR6046133 HR-TB lineage4.9 None
ERR1336825 Sensitive La3;M.canetti None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR551057 Other M.canetti None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR266120 Sensitive M.canetti None
ERR3597007 Sensitive M.canetti None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR16058674 Other M.canetti None
ERR3804169 HR-TB lineage4.1.3 None
ERR266109 Sensitive M.canetti None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None