Rv3793 - c.375G>C
Drug resistance types
57 Sensitive
2 RR-TB
7 HR-TB
7 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 67 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti | 11 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 2 |
| La2;M.canetti | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818567 | Other | M.canetti | dj | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR16058668 | Sensitive | M.canetti | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4815361 | Other | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR551056 | Sensitive | M.canetti | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3597006 | Other | La3;M.canetti | None | ERR551057 | Other | M.canetti | None | ERR266106 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | SRR5818653 | Sensitive | M.canetti | dj | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR5818676 | Other | M.canetti | dj | ERR1336821 | Sensitive | La3;M.canetti | None | ERR551182 | Sensitive | M.canetti | None | ERR266124 | Other | M.canetti | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR551180 | Sensitive | M.canetti | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR3597004 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR5818614 | Sensitive | M.canetti | dj | ERR266108 | Sensitive | M.canetti | None | ERR313113 | Other | M.canetti | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR9125480 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR551181 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR7451301 | Sensitive | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR1336822 | Sensitive | M.canetti | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR552304 | Sensitive | M.canetti | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR266107 | Other | M.canetti | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR266110 | Other | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR313115 | Other | M.canetti | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR18289196 | Sensitive | M.canetti | None | SRR18289195 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR3597007 | Sensitive | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR552305 | Sensitive | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | SRR10177260 | Other | M.canetti | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR10177262 | Sensitive | M.canetti | None | SRR22179528 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | SRR6045555 | Other | lineage4.9 | None | ERR266121 | Sensitive | M.canetti | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | ERR266123 | Sensitive | M.canetti | None | ERR551179 | Sensitive | M.canetti | None |
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