Rv3245c - c.252A>G
Drug resistance types
6 Sensitive
1 RR-TB
25 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;lineage4.9 | 1 |
| M.canetti | 4 |
| La3;M.canetti | 9 |
| La3;lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.9 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.2.BCG | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 4 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage2.2.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| 2 | |
| La3;lineage4.8 | 1 |
| lineage4.3.4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7 | 1 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 64 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR5818614 | Other | M.canetti | dj | ERR9125480 | Other | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR16058668 | Other | M.canetti | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR234659 | HR-TB | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR266123 | Other | M.canetti | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3597006 | Other | La3;M.canetti | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR9786604 | Other | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None |
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