Rv3596c - c.1369C>T


Drug resistance types
88 Sensitive 0 RR-TB 3 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 65 Other
lineage Counts
lineage Count
lineage4.9 33
La1.8.1 26
M.canetti 67
lineage4 4
La3;M.canetti 10
La1.7;lineage4.9 1
lineage2.1 1
lineage4.5 1
lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage4.9 1
La2;M.canetti 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.2.1 2
lineage3 1
lineage2.1;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.9;lineage6 1
lineage4.1.1.1 1
lineage4.1;lineage4.9 1
lineage4.6.1.1 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
SRR7617592 Other La1.8.1 None
SRR16058668 Sensitive M.canetti None
ERR266107 Other M.canetti None
ERR4815361 Other M.canetti None
SRR3675292 Sensitive lineage4.9 None
SRR7617688 Other La1.8.1 None
SRR7617451 Other La1.8.1 None
ERR266110 Other M.canetti None
ERR313113 Other M.canetti None
ERR552307 Sensitive M.canetti None
ERR373945 Sensitive lineage4.9 None
SRR7617388 Other La1.8.1 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR313115 Other M.canetti None
ERR3597006 Other La3;M.canetti None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR551057 Other M.canetti None
ERR313117 Other M.canetti None
SRR7617593 Other La1.8.1 None
SRR18289195 Sensitive M.canetti None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR7451300 Sensitive M.canetti None
SRR7617692 Other La1.8.1 None
ERR9125475 Other M.canetti None
ERR363445 Other lineage4.9 None
ERR702406 Other lineage2.1 None
SRR7617583 Other La1.8.1 None
SRR7617833 Other La1.8.1 None
ERR1336821 Sensitive La3;M.canetti None
SRR6045706 Sensitive lineage4.9 None
SRR10177260 Other M.canetti None
ERR551180 Sensitive M.canetti None
ERR1043163 Other La3;M.canetti None
ERR4817181 Sensitive M.canetti None
ERR349264 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR3597003 Sensitive M.canetti None
SRR7617530 Other La1.8.1 None
ERR1336823 Sensitive La3;M.canetti None
ERR266121 Sensitive M.canetti None
SRR7617459 Other La1.8.1 None
SRR7617753 Other La1.8.1 None
SRR24061599 Sensitive M.canetti None
SRR24061600 Sensitive M.canetti None
ERR266122 Sensitive La3;M.canetti None
ERR313116 Sensitive M.canetti None
SRR7617844 Other La1.8.1 None
ERR11068345 Sensitive lineage4.5 None
ERR4819927 Sensitive M.canetti None
SRR7617689 Other La1.8.1 None
SRR7617709 Other La1.8.1 None
SRR5818567 Other M.canetti dj
ERR3597004 Sensitive M.canetti None
ERR363498 Sensitive lineage4.9 None
SRR10522763 Sensitive M.canetti None
SRR3675265 Other lineage4 None
SRR7617477 Other La1.8.1 None
SRR7617546 Other La1.8.1 None
SRR5818614 Sensitive M.canetti dj
ERR551056 Sensitive M.canetti None
ERR363479 Sensitive lineage4.9 None
SRR10177259 Other M.canetti None
SRR10522783 Sensitive M.canetti None
ERR1336825 Sensitive La3;M.canetti None
ERR363449 Sensitive lineage4.9 None
ERR9125480 Sensitive M.canetti None
SRR3675209 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR7617834 Other La1.8.1 None
SRR6045371 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR18289196 Sensitive M.canetti None
ERR266120 Sensitive M.canetti None
SRR5818652 Sensitive M.canetti dj
ERR3597007 Sensitive M.canetti None
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
ERR4816019 Sensitive M.canetti None
SRR10177258 Other M.canetti None
ERR552305 Sensitive M.canetti None
ERR7451301 Sensitive M.canetti None
SRR5818676 Other M.canetti dj
SRR24061598 Sensitive M.canetti None
ERR363447 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR373947 Other lineage4.9 None
ERR266124 Other M.canetti None
ERR1043164 Other La3;M.canetti None
SRR7617595 Other La1.8.1 None
ERR363456 Sensitive lineage4.9 None
SRR10177262 Sensitive M.canetti None
ERR11252612 Other La3;lineage4.9 None
SRR5818668 Sensitive M.canetti dj
SRR5818685 Sensitive M.canetti None
SRR24061597 Sensitive M.canetti None
SRR6045503 Sensitive lineage4.9 None
ERR3597005 Sensitive M.canetti None
ERR363500 Sensitive lineage4.9 None
ERR266126 Sensitive La2;M.canetti None
ERR369162 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR3597001 Sensitive M.canetti None
ERR1336822 Sensitive M.canetti None
ERR552304 Sensitive M.canetti None
ERR551055 Sensitive M.canetti None
SRR6650709 Sensitive M.canetti None
ERR4178309 Other lineage4.1.2.1 None
SRR10177261 Sensitive M.canetti None
ERR1336824 Sensitive La3;M.canetti None
ERR266108 Sensitive M.canetti None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
SRR7617364 Other La1.8.1 None
ERR3597002 Other M.canetti None
ERR349265 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR266106 Sensitive M.canetti None
ERR6865513 Other lineage4.1.2.1 None
SRR5818653 Sensitive M.canetti dj
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR7617621 Other La1.8.1 None
SRR7617531 Other La1.8.1 None
ERR1336820 Sensitive La3;M.canetti None
ERR266109 Sensitive M.canetti None
ERR369160 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR10177263 Sensitive M.canetti None
SRR5818661 Other M.canetti dj
ERR551182 Sensitive M.canetti None
ERR323043 Other lineage2.1;lineage4.9 None
ERR552306 Sensitive M.canetti;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR373946 Sensitive lineage4.9 None
SRR28170812 Sensitive M.canetti None
SRR5818605 Other M.canetti None
ERR1336826 Sensitive La3;M.canetti None
SRR7617453 Other La1.8.1 None
ERR349296 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR363446 Sensitive lineage4.9 None
SRR22179528 Sensitive M.canetti None
ERR313114 Sensitive M.canetti None
SRR7617594 Other La1.8.1 None
SRR7617381 Other La1.8.1 None
ERR551179 Sensitive M.canetti None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR7617537 Sensitive La1.8.1 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4821046 Sensitive M.canetti None
SRR7617649 Other La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None