Rv3596c - c.1369C>T
Drug resistance types
88 Sensitive
0 RR-TB
3 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 33 |
| La1.8.1 | 26 |
| M.canetti | 67 |
| lineage4 | 4 |
| La3;M.canetti | 10 |
| La1.7;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR7617592 | Other | La1.8.1 | None | SRR16058668 | Sensitive | M.canetti | None | ERR266107 | Other | M.canetti | None | ERR4815361 | Other | M.canetti | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR7617688 | Other | La1.8.1 | None | SRR7617451 | Other | La1.8.1 | None | ERR266110 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR373945 | Sensitive | lineage4.9 | None | SRR7617388 | Other | La1.8.1 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR313115 | Other | M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR551057 | Other | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR7617593 | Other | La1.8.1 | None | SRR18289195 | Sensitive | M.canetti | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR7451300 | Sensitive | M.canetti | None | SRR7617692 | Other | La1.8.1 | None | ERR9125475 | Other | M.canetti | None | ERR363445 | Other | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR7617583 | Other | La1.8.1 | None | SRR7617833 | Other | La1.8.1 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR10177260 | Other | M.canetti | None | ERR551180 | Sensitive | M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | SRR7617530 | Other | La1.8.1 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR266121 | Sensitive | M.canetti | None | SRR7617459 | Other | La1.8.1 | None | SRR7617753 | Other | La1.8.1 | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR313116 | Sensitive | M.canetti | None | SRR7617844 | Other | La1.8.1 | None | ERR11068345 | Sensitive | lineage4.5 | None | ERR4819927 | Sensitive | M.canetti | None | SRR7617689 | Other | La1.8.1 | None | SRR7617709 | Other | La1.8.1 | None | SRR5818567 | Other | M.canetti | dj | ERR3597004 | Sensitive | M.canetti | None | ERR363498 | Sensitive | lineage4.9 | None | SRR10522763 | Sensitive | M.canetti | None | SRR3675265 | Other | lineage4 | None | SRR7617477 | Other | La1.8.1 | None | SRR7617546 | Other | La1.8.1 | None | SRR5818614 | Sensitive | M.canetti | dj | ERR551056 | Sensitive | M.canetti | None | ERR363479 | Sensitive | lineage4.9 | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR363449 | Sensitive | lineage4.9 | None | ERR9125480 | Sensitive | M.canetti | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR7617834 | Other | La1.8.1 | None | SRR6045371 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | ERR3597007 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR5818676 | Other | M.canetti | dj | SRR24061598 | Sensitive | M.canetti | None | ERR363447 | Other | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR373947 | Other | lineage4.9 | None | ERR266124 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR7617595 | Other | La1.8.1 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR10177262 | Sensitive | M.canetti | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR3597005 | Sensitive | M.canetti | None | ERR363500 | Sensitive | lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR369162 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR3597001 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | ERR552304 | Sensitive | M.canetti | None | ERR551055 | Sensitive | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR10177261 | Sensitive | M.canetti | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR266108 | Sensitive | M.canetti | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR7617364 | Other | La1.8.1 | None | ERR3597002 | Other | M.canetti | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR266106 | Sensitive | M.canetti | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR5818653 | Sensitive | M.canetti | dj | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR7617621 | Other | La1.8.1 | None | SRR7617531 | Other | La1.8.1 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR10177263 | Sensitive | M.canetti | None | SRR5818661 | Other | M.canetti | dj | ERR551182 | Sensitive | M.canetti | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR552306 | Sensitive | M.canetti;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR7617453 | Other | La1.8.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR22179528 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | SRR7617594 | Other | La1.8.1 | None | SRR7617381 | Other | La1.8.1 | None | ERR551179 | Sensitive | M.canetti | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR7617537 | Sensitive | La1.8.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4821046 | Sensitive | M.canetti | None | SRR7617649 | Other | La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None |
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