Rv3596c - c.1353C>T
Drug resistance types
64 Sensitive
3 RR-TB
26 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 8 |
| lineage4 | 37 |
| lineage2.2.1 | 15 |
| 61 | |
| lineage2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage2.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 2 |
| La1 | 1 |
| La1.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage6.1.3 | 1 |
| La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR24061598 | Sensitive | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR11081313 | Sensitive | lineage4.3.4.2 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR16058668 | Sensitive | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR22179528 | Sensitive | None | SRR24061597 | Sensitive | None | SRR24061599 | Sensitive | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR24061600 | Sensitive | None | ERR158583 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4815361 | Sensitive | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675502 | Other | None | ERR4816019 | Sensitive | None | SRR3675550 | Other | None | SRR5341366 | Sensitive | lineage4 | None | SRR5818668 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818567 | Sensitive | dj | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR212033 | HR-TB | None | ERR4817181 | Sensitive | None | SRR5818653 | Sensitive | dj | SRR5818661 | Sensitive | dj | SRR5818652 | Sensitive | dj | SRR5341387 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR4819927 | Sensitive | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821046 | Sensitive | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5818605 | Sensitive | None | SRR5818685 | Sensitive | None | SRR6046482 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | SRR6896478 | HR-TB | lineage4.4.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR3597006 | Sensitive | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3597003 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3283028 | Other | None | ERR3283041 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3597005 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3597007 | Sensitive | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR4769552 | Other | La1.3 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR7451301 | Sensitive | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR245758 | Other | lineage4.9.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR7451300 | Sensitive | None | ERR751326 | Sensitive | lineage4 | None | SRR26112461 | Sensitive | lineage4.3.4.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9125480 | Sensitive | None | ERR9786843 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None |
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