Rv3794 - c.1791A>G
Drug resistance types
62 Sensitive
0 RR-TB
29 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.9 | 2 |
| La3;M.canetti | 11 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| M.canetti | 67 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.6.2.2 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.9 | 11 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage1.1.1 | 1 |
| La1.7;lineage4.9 | 1 |
| 1 | |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La2;M.canetti | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR266125 | Other | La3;M.canetti | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4821046 | Sensitive | M.canetti | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR5818567 | Other | M.canetti | dj | ERR3597004 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR16058668 | Sensitive | M.canetti | None | ERR266107 | Other | M.canetti | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6650709 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | ERR266110 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR266106 | Sensitive | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR5818652 | Sensitive | M.canetti | dj | ERR3597007 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | SRR10177263 | Sensitive | M.canetti | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR5818661 | Other | M.canetti | dj | ERR551182 | Sensitive | M.canetti | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR10177260 | Other | M.canetti | None | ERR266124 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR10177262 | Sensitive | M.canetti | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR3597003 | Sensitive | M.canetti | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR22179528 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR3597005 | Sensitive | M.canetti | None | SRR22249828 | Sensitive | lineage1.1.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | ERR4815361 | Other | M.canetti | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR266108 | Sensitive | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR313115 | Other | M.canetti | None | ERR551057 | Other | M.canetti | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR7451300 | Sensitive | M.canetti | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4816019 | Sensitive | M.canetti | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR7451301 | Sensitive | M.canetti | None | SRR5818676 | Other | M.canetti | dj | ERR3797046 | HR-TB | lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1043163 | Other | La3;M.canetti | None | ERR4817181 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | ERR266121 | Sensitive | M.canetti | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR3283042 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR266123 | Sensitive | M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR552304 | Sensitive | M.canetti | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5818614 | Sensitive | M.canetti | dj | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR10177259 | Other | M.canetti | None | ERR4799025 | Other | lineage4.8 | None | SRR10522783 | Sensitive | M.canetti | None | SRR14782054 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR3597006 | Other | La3;M.canetti | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR161037 | Other | lineage4.9 | None | ERR313117 | Other | M.canetti | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR18289195 | Sensitive | M.canetti | None | SRR5818653 | Sensitive | M.canetti | dj | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR10177258 | Other | M.canetti | None | ERR552305 | Sensitive | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | ERR1336821 | Sensitive | La3;M.canetti | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None |
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