Rv1484 - c.-123C>G
Drug resistance types
25 Sensitive
2 RR-TB
32 HR-TB
10 MDR-TB
1 Pre-XDR-TB
3 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti | 2 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.9 | 41 |
| lineage4.1.2.1 | 4 |
| 11 | |
| lineage2.1 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 6 |
| lineage4.9;lineage6.3 | 6 |
| lineage2.1;lineage4.9 | 9 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| La1.7 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.1.3 | 1 |
| La3;lineage4.9 | 6 |
| La3 | 1 |
| lineage3.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.1;lineage4.8 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage5.2 | 2 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.1.1 | 1 |
| La3;lineage4 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 152 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1043163 | Other | La3;M.canetti | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR9786604 | Other | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675222 | Other | La1.7 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4815604 | Other | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR29051077 | Other | lineage4.9 | None | SRR6789626 | Other | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR28119753 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR28119752 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR212033 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR176651 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR161037 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR702406 | Other | lineage2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | ERR234659 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR10808730 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR1336823 | Sensitive | La3;M.canetti | None | SRR1184372 | MDR-TB | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR387051 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR4830353 | Other | La1.7 | None | SRR1169249 | Other | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR3675236 | Other | None | SRR28119777 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR7496509 | Other | None | ERR176751 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None |
|---|
