Rv3795 - p.Ser565Gly
Drug resistance types
25 Sensitive
20 RR-TB
54 HR-TB
51 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage8 | 5 |
| lineage2.2.1.1 | 4 |
| lineage4.6.2.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1 | 24 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti | 68 |
| La3;M.canetti | 11 |
| M.canetti;lineage4.2 | 1 |
| lineage4.9 | 49 |
| M.canetti;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 2 |
| 5 | |
| lineage4 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.8.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.8 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage4.3.2.1 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage6.1.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.9.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| lineage4.1.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage5.2 | 2 |
| lineage1.2.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 254 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10828835 | MDR-TB | lineage8 | None | SAMN02567762 | MDR-TB | lineage8 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6397752 | Sensitive | lineage2.2.1 | ca | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR10177260 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR21576607 | RR-TB | lineage2.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR551179 | Sensitive | M.canetti | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR22179528 | Other | M.canetti | None | SRR21576626 | RR-TB | lineage2.2.1 | None | ERR987722 | MDR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR5341330 | Other | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR13423649 | Other | lineage2.2.1 | None | SRR5818567 | Other | M.canetti | dj | SRR24061600 | Other | M.canetti | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3597001 | Other | M.canetti | None | SRR1791747 | Other | La1.8.1 | None | ERR3597005 | Other | M.canetti | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR6832787 | Other | lineage2.2.1 | None | ERR266110 | Other | M.canetti | None | ERR551055 | Other | M.canetti | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR10522783 | Sensitive | M.canetti | None | SRR5818652 | Other | M.canetti | dj | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR17832802 | HR-TB | lineage3 | None | ERR9125480 | Other | M.canetti | None | ERR313115 | Other | M.canetti | None | SRR7236177 | Other | La1.8.1 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR8186780 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816019 | Other | M.canetti | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR552305 | Other | M.canetti | None | SRR21747012 | MDR-TB | lineage2.2.1 | None | ERR551182 | Sensitive | M.canetti | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR10177262 | Other | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR313114 | Other | M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR21576544 | RR-TB | lineage2.2.1 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR24061598 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR14520095 | Sensitive | lineage2.2.1 | None | ERR1043163 | Other | La3;M.canetti | None | SRR1173725 | MDR-TB | lineage8 | None | ERR7451301 | Other | M.canetti | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR266108 | Other | M.canetti | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR7451300 | Sensitive | M.canetti | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR10177261 | Other | M.canetti | None | SRR28170812 | Other | M.canetti | None | ERR2514692 | Other | None | ERR9787197 | Other | None | SRR18289196 | Other | M.canetti | None | ERR3597004 | Sensitive | M.canetti | None | ERR137286 | Other | lineage4.9 | None | ERR266125 | Other | La3;M.canetti | None | ERR266106 | Other | M.canetti | None | SRR21576696 | MDR-TB | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR266123 | Other | M.canetti | None | ERR4815361 | Other | M.canetti | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4819927 | Other | M.canetti | None | ERR552307 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4821046 | Other | M.canetti | None | SRR5818668 | Other | M.canetti | dj | SRR24061597 | Sensitive | M.canetti | None | SRR5341310 | Other | lineage1.1.2 | None | SRR24061599 | Other | M.canetti | None | ERR323066 | HR-TB | lineage4.9 | None | ERR3597006 | Other | La3;M.canetti | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR10177263 | Other | M.canetti | None | ERR3597007 | Other | M.canetti | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR22251417 | HR-TB | lineage2.2.1 | None | SRR16058674 | Other | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | ERR1336823 | Sensitive | La3;M.canetti | None | SRR21747048 | MDR-TB | lineage2.2.1 | None | SRR21576638 | MDR-TB | lineage2.2.1 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR5818685 | Other | M.canetti | None | ERR266122 | Other | La3;M.canetti | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR10177258 | Other | M.canetti | None | ERR551056 | Other | M.canetti | None | SRR5818676 | Other | M.canetti | dj | SRR6650709 | Other | M.canetti | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR266124 | Other | M.canetti | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR5818605 | Other | M.canetti | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR18289195 | Sensitive | M.canetti | None | ERR1063896 | HR-TB | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR3597003 | Other | M.canetti | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR6397703 | Sensitive | lineage2.2.1 | ca | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR10522763 | Sensitive | M.canetti | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR266109 | Other | M.canetti | None | ERR266107 | Other | M.canetti | None | ERR245758 | Other | lineage4.9.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR16058668 | Other | M.canetti | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR552304 | Other | M.canetti | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR12115321 | MDR-TB | lineage8 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR266126 | Other | La2;M.canetti | None | SRR1173284 | MDR-TB | lineage8 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR6397572 | Sensitive | lineage2.2.1 | ca | ERR313113 | Other | M.canetti | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR3597002 | Other | M.canetti | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR313116 | Other | M.canetti | None | ERR266120 | Other | M.canetti | None | SRR5818614 | Other | M.canetti | dj | ERR4821655 | HR-TB | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR266121 | Other | M.canetti | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR551057 | Other | M.canetti | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR313117 | Other | M.canetti | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR11049563 | Sensitive | lineage1.2.2.1 | None | SRR5818653 | Other | M.canetti | dj | ERR7821123 | Other | lineage1.1.3.2 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4817181 | Other | M.canetti | None | ERR551180 | Sensitive | M.canetti | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None |
|---|
