Rv0006 - c.222C>G
Drug resistance types
105 Sensitive
5 RR-TB
137 HR-TB
24 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 6 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage5.2 | 2 |
| 143 | |
| lineage4.3.3 | 5 |
| lineage4.6.2.2 | 4 |
| lineage4.1.2.1 | 15 |
| lineage2 | 2 |
| lineage2.2.1 | 16 |
| lineage4 | 74 |
| lineage4.6.1.1 | 2 |
| lineage2.2.2 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 59 |
| lineage3.1 | 4 |
| lineage1.2.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.8 | 5 |
| lineage2.1 | 2 |
| La1.8.1 | 4 |
| lineage9;lineage3.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1 | 3 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage4.3 | 1 |
| lineage4.8;La3 | 2 |
| lineage3 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.2 | 3 |
| lineage1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2 | 1 |
| La1.2 | 1 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 390 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9634265 | Sensitive | None | ERR9119669 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR10305641 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172234 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1196768 | MDR-TB | None | SRR13861241 | HR-TB | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR13861449 | Other | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR15368973 | Other | None | SRR16157123 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR161033 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675234 | Other | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675222 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675383 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR1723732 | Sensitive | lineage2.2.1 | cn | SRR3675456 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | ERR176751 | HR-TB | None | SRR3675503 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR212001 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4816466 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4819051 | Other | lineage4 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341396 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341456 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2446382 | Other | lineage4 | None | ERR2514929 | HR-TB | lineage1.1.2 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693230 | Other | None | SRR6045526 | HR-TB | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR2660539 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6046133 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045952 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046362 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6325442 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4818958 | Sensitive | lineage4.1.1.1 | gb | ERR4831638 | Sensitive | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR502943 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR3283017 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR3597006 | Sensitive | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797044 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4811105 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6358991 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR702404 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None |
|---|
