ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
ERR3597002
|
Other
|
M.canetti
|
None
|
ERR13265388
|
Sensitive
|
lineage2.2.1
|
None
|
ERR313115
|
Other
|
M.canetti
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR266106
|
Sensitive
|
M.canetti
|
None
|
ERR9125480
|
Sensitive
|
M.canetti
|
None
|
ERR9634265
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR5818652
|
Sensitive
|
M.canetti
|
dj
|
ERR9125475
|
Other
|
M.canetti
|
None
|
ERR4816019
|
Sensitive
|
M.canetti
|
None
|
ERR266109
|
Sensitive
|
M.canetti
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR11465352
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR5818676
|
Other
|
M.canetti
|
dj
|
SRR10177260
|
Other
|
M.canetti
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4817181
|
Sensitive
|
M.canetti
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR24061599
|
Sensitive
|
M.canetti
|
None
|
SRR24061600
|
Sensitive
|
M.canetti
|
None
|
ERR266126
|
Sensitive
|
La2;M.canetti
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR313116
|
Sensitive
|
M.canetti
|
None
|
ERR551179
|
Sensitive
|
M.canetti
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
ERR4821046
|
Sensitive
|
M.canetti
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR3797044
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
ERR551055
|
Sensitive
|
M.canetti
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR5818614
|
Sensitive
|
M.canetti
|
dj
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR10177261
|
Sensitive
|
M.canetti
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR551056
|
Sensitive
|
M.canetti
|
None
|
ERR266110
|
Other
|
M.canetti
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
SRR10177259
|
Other
|
M.canetti
|
None
|
SRR10522783
|
Sensitive
|
M.canetti
|
None
|
ERR13265488
|
Sensitive
|
lineage2.2.1
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR313117
|
Other
|
M.canetti
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
SRR18289195
|
Sensitive
|
M.canetti
|
None
|
ERR266120
|
Sensitive
|
M.canetti
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
SRR16058674
|
Other
|
M.canetti
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR7451301
|
Sensitive
|
M.canetti
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
ERR551182
|
Sensitive
|
M.canetti
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR28170812
|
Sensitive
|
M.canetti
|
None
|
SRR5818605
|
Other
|
M.canetti
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
SRR10177262
|
Sensitive
|
M.canetti
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR22179528
|
Sensitive
|
M.canetti
|
None
|
ERR313114
|
Sensitive
|
M.canetti
|
None
|
SRR5818668
|
Sensitive
|
M.canetti
|
dj
|
SRR5818685
|
Sensitive
|
M.canetti
|
None
|
SRR24061597
|
Sensitive
|
M.canetti
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR4819927
|
Sensitive
|
M.canetti
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR3597004
|
Sensitive
|
M.canetti
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
ERR4815361
|
Other
|
M.canetti
|
None
|
SRR6650709
|
Sensitive
|
M.canetti
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR266108
|
Sensitive
|
M.canetti
|
None
|
ERR313113
|
Other
|
M.canetti
|
None
|
SRR29097004
|
Other
|
lineage3
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR552307
|
Sensitive
|
M.canetti
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
ERR212123
|
Other
|
lineage4.9
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
ERR3597006
|
Other
|
La3;M.canetti
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR551057
|
Other
|
M.canetti
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR18289196
|
Sensitive
|
M.canetti
|
None
|
SRR5818653
|
Sensitive
|
M.canetti
|
dj
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3597007
|
Sensitive
|
M.canetti
|
None
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
SRR10177263
|
Sensitive
|
M.canetti
|
None
|
SRR10177258
|
Other
|
M.canetti
|
None
|
SRR5818661
|
Other
|
M.canetti
|
dj
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR552305
|
Sensitive
|
M.canetti
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR24061598
|
Sensitive
|
M.canetti
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR266124
|
Other
|
M.canetti
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR3597003
|
Sensitive
|
M.canetti
|
None
|
ERR266121
|
Sensitive
|
M.canetti
|
None
|
ERR266122
|
Sensitive
|
La3;M.canetti
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
ERR3597005
|
Sensitive
|
M.canetti
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
ERR266123
|
Sensitive
|
M.canetti
|
None
|
ERR266125
|
Other
|
La3;M.canetti
|
None
|
ERR3597001
|
Sensitive
|
M.canetti
|
None
|
ERR1336822
|
Sensitive
|
M.canetti
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR552304
|
Sensitive
|
M.canetti
|
None
|
SRR5818567
|
Other
|
M.canetti
|
dj
|
SRR10522763
|
Sensitive
|
M.canetti
|
None
|
SRR16058668
|
Sensitive
|
M.canetti
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR266107
|
Other
|
M.canetti
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|