Rv3601c - c.39C>G
Drug resistance types
61 Sensitive
0 RR-TB
2 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti | 10 |
| M.canetti | 68 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR1336824 | Sensitive | La3;M.canetti | None |
| ERR266110 | Other | M.canetti | None |
| SRR10177259 | Other | M.canetti | None |
| SRR10522783 | Sensitive | M.canetti | None |
| ERR3597002 | Other | M.canetti | None |
| ERR1336825 | Sensitive | La3;M.canetti | None |
| ERR551057 | Other | M.canetti | None |
| ERR313117 | Other | M.canetti | None |
| SRR29056248 | Sensitive | M.canetti | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR5818652 | Sensitive | M.canetti | dj |
| SRR5818653 | Sensitive | M.canetti | dj |
| ERR1336820 | Sensitive | La3;M.canetti | None |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR266109 | Sensitive | M.canetti | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR10177258 | Other | M.canetti | None |
| SRR5818661 | Other | M.canetti | dj |
| ERR552305 | Sensitive | M.canetti | None |
| ERR551182 | Sensitive | M.canetti | None |
| ERR266124 | Other | M.canetti | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| ERR1043164 | Other | La3;M.canetti | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR1336826 | Sensitive | La3;M.canetti | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR4817181 | Sensitive | M.canetti | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR266121 | Sensitive | M.canetti | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR266122 | Sensitive | La3;M.canetti | None |
| ERR3597005 | Sensitive | M.canetti | None |
| ERR4819927 | Sensitive | M.canetti | None |
| ERR551179 | Sensitive | M.canetti | None |
| SRR5341373 | Other | lineage4.9 | None |
| ERR3597001 | Sensitive | M.canetti | None |
| ERR1336822 | Sensitive | M.canetti | None |
| ERR4821046 | Sensitive | M.canetti | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR266108 | Sensitive | M.canetti | None |
| ERR313113 | Other | M.canetti | None |
| ERR3597006 | Other | La3;M.canetti | None |
| ERR266106 | Sensitive | M.canetti | None |
| ERR9125480 | Sensitive | M.canetti | None |
| SRR18289196 | Sensitive | M.canetti | None |
| SRR18289195 | Sensitive | M.canetti | None |
| ERR266120 | Sensitive | M.canetti | None |
| ERR7451301 | Sensitive | M.canetti | None |
| SRR24061598 | Sensitive | M.canetti | None |
| ERR1336821 | Sensitive | La3;M.canetti | None |
| ERR552306 | Sensitive | M.canetti;lineage4.9 | None |
| SRR10177260 | Other | M.canetti | None |
| SRR10177262 | Sensitive | M.canetti | None |
| ERR3597003 | Sensitive | M.canetti | None |
| SRR22179528 | Sensitive | M.canetti | None |
| SRR5818668 | Sensitive | M.canetti | dj |
| SRR5818685 | Sensitive | M.canetti | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| SRR24061599 | Sensitive | M.canetti | None |
| SRR24061600 | Sensitive | M.canetti | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR266107 | Other | M.canetti | None |
| ERR551055 | Sensitive | M.canetti | None |
| SRR5818614 | Sensitive | M.canetti | dj |
| ERR4815361 | Other | M.canetti | None |
| SRR6650709 | Sensitive | M.canetti | None |
| ERR551056 | Sensitive | M.canetti | None |
| ERR552307 | Sensitive | M.canetti | None |
| ERR313115 | Other | M.canetti | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR3597007 | Sensitive | M.canetti | None |
| ERR551181 | Sensitive | M.canetti | None |
| ERR7451300 | Sensitive | M.canetti | None |
| SRR16058674 | Other | M.canetti | None |
| ERR9125475 | Other | M.canetti | None |
| ERR4816019 | Sensitive | M.canetti | None |
| SRR10177263 | Sensitive | M.canetti | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR5818676 | Other | M.canetti | dj |
| SRR28170812 | Sensitive | M.canetti | None |
| SRR5818605 | Other | M.canetti | None |
| ERR551180 | Sensitive | M.canetti | None |
| ERR1043163 | Other | La3;M.canetti | None |
| ERR1336823 | Sensitive | La3;M.canetti | None |
| ERR313114 | Sensitive | M.canetti | None |
| SRR24061597 | Sensitive | M.canetti | None |
| ERR266126 | Sensitive | La2;M.canetti | None |
| ERR313116 | Sensitive | M.canetti | None |
| ERR552304 | Sensitive | M.canetti | None |
| SRR5818567 | Other | M.canetti | dj |
| ERR3597004 | Sensitive | M.canetti | None |
| SRR10522763 | Sensitive | M.canetti | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR16058668 | Sensitive | M.canetti | None |
| SRR10177261 | Sensitive | M.canetti | None |
