Rv3596c - c.882T>G
Drug resistance types
60 Sensitive
5 RR-TB
14 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| La3;lineage4.3.4 | 1 |
| lineage4.9 | 8 |
| M.canetti | 64 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage9 | 1 |
| La3;M.canetti | 10 |
| La1.7;lineage4.9 | 2 |
| La2;M.canetti | 1 |
| La3;lineage4.9 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3.1.2.1 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 1 |
| lineage2.2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | ERR9125480 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | SRR10177260 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | SRR9971112 | Other | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4817181 | Sensitive | M.canetti | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3597001 | Sensitive | M.canetti | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR266107 | Other | M.canetti | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR551055 | Sensitive | M.canetti | None | SRR5818614 | Sensitive | M.canetti | dj | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR551056 | Sensitive | M.canetti | None | ERR266110 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR3597006 | Other | La3;M.canetti | None | ERR551057 | Other | M.canetti | None | SRR18289195 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | ERR266124 | Other | M.canetti | None | SRR20970016 | Other | lineage2.2 | None | ERR3597003 | Sensitive | M.canetti | None | SRR22179528 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | ERR736875 | HR-TB | lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj | ERR266121 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR5535933 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR1063855 | Other | lineage4.9 | None | ERR266106 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR5818653 | Sensitive | M.canetti | dj | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR1336821 | Sensitive | La3;M.canetti | None | ERR552306 | Sensitive | M.canetti;lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | SRR10177262 | Sensitive | M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | SRR10808730 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR24061597 | Sensitive | M.canetti | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR552304 | Sensitive | M.canetti | None | SRR5818567 | Other | M.canetti | dj | ERR3597004 | Sensitive | M.canetti | None | SRR16058668 | Sensitive | M.canetti | None | ERR4815361 | Other | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR266108 | Sensitive | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR313115 | Other | M.canetti | None |
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