Rv1854c - c.252A>G
Drug resistance types
2 Sensitive
0 RR-TB
20 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.9 | 9 |
| La1.6;La3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 3 |
| La1.2.BCG | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La2;M.canetti | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;M.canetti | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.1.3 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La3;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| La1.7.1 | 1 |
| M.canetti | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR4819241 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3597006 | Other | La3;M.canetti | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR4816656 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR7236378 | Other | La1.7.1 | None | ERR266124 | Other | M.canetti | None | SRR7496472 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR10808730 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
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