Rv3596c - c.1005C>T


Drug resistance types
123 Sensitive 2 RR-TB 3 HR-TB 1 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 37 Other
lineage Counts
lineage Count
lineage2.2.1;lineage4 1
M.canetti 66
lineage2.2.1;lineage4.9 2
La3;lineage4.9 8
lineage4.9 42
La3;M.canetti 10
lineage4.1.2.1 21
La2;M.canetti 1
2
lineage4.3.3 1
La1.3 1
M.canetti;lineage4.9 2
lineage6.1.3 1
La1.7;lineage4.9 1
lineage4.1.2 1
La3;lineage4 1
lineage2.2.1;lineage3 1
lineage4 1
lineage3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1.1 1
lineage2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 167
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR551056 Sensitive M.canetti None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR266108 Sensitive M.canetti None
ERR552307 Sensitive M.canetti None
ERR3283031 Sensitive La3;lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR9125480 Sensitive M.canetti None
ERR313117 Other M.canetti None
ERR3283011 Other La3;lineage4.9 None
SRR18289195 Sensitive M.canetti None
SRR5818652 Sensitive M.canetti dj
ERR1336820 Sensitive La3;M.canetti None
ERR266109 Sensitive M.canetti None
SRR8217918 HR-TB lineage4.9 None
SRR10177258 Other M.canetti None
ERR7451301 Sensitive M.canetti None
SRR1180399 Sensitive lineage4.9 None
SRR24061598 Sensitive M.canetti None
ERR551182 Sensitive M.canetti None
ERR266124 Other M.canetti None
ERR1043164 Other La3;M.canetti None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR551180 Sensitive M.canetti None
SRR1181402 Sensitive lineage4.9 None
SRR10177262 Sensitive M.canetti None
SRR20632814 Sensitive lineage4.9 None
ERR3994097 Sensitive lineage4.1.2.1 None
ERR313114 Sensitive M.canetti None
SRR5818668 Sensitive M.canetti dj
SRR5818685 Sensitive M.canetti None
SRR1180312 Sensitive lineage4.9 None
SRR24061597 Sensitive M.canetti None
SRR1175513 Sensitive lineage4.9 None
ERR266126 Sensitive La2;M.canetti None
ERR4796577 HR-TB None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR2884669 Sensitive lineage4.1.2.1 es
SRR1180345 Other lineage4.9 None
SRR1238559 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR3597004 Sensitive M.canetti None
SRR10522763 Sensitive M.canetti None
SRR1180391 Sensitive lineage4.9 None
ERR551055 Sensitive M.canetti None
SRR5153091 HR-TB lineage4.3.3 None
SRR5818614 Sensitive M.canetti dj
ERR4815361 Other M.canetti None
SRR6650709 Sensitive M.canetti None
SRR10177261 Sensitive M.canetti None
ERR1336824 Sensitive La3;M.canetti None
ERR266110 Other M.canetti None
SRR1184021 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR10177259 Other M.canetti None
SRR10522783 Sensitive M.canetti None
ERR313113 Other M.canetti None
SRR16156775 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR9121483 Sensitive lineage4.1.2.1 None
ERR1336825 Sensitive La3;M.canetti None
ERR313115 Other M.canetti None
ERR3797063 Sensitive La3;lineage4.9 None
ERR551057 Other M.canetti None
SRR21690151 Sensitive lineage4.1.2.1 None
SRR18289196 Sensitive M.canetti None
ERR266120 Sensitive M.canetti None
ERR9121236 Sensitive lineage4.1.2.1 None
ERR3597007 Sensitive M.canetti None
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
ERR4769552 Sensitive La1.3 None
ERR9125475 Other M.canetti None
ERR4816019 Sensitive M.canetti None
ERR11067261 Sensitive lineage4.1.2.1 None
ERR3797064 Other La3;lineage4.9 None
SRR10177263 Sensitive M.canetti None
SRR5818661 Other M.canetti dj
ERR552305 Sensitive M.canetti None
SRR1175512 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR552306 Sensitive M.canetti;lineage4.9 None
SRR10177260 Other M.canetti None
ERR12544076 Sensitive lineage4.1.2.1 None
ERR2884661 Sensitive lineage4.1.2.1 None
ERR1336826 Sensitive La3;M.canetti None
ERR9121293 Sensitive lineage4.1.2.1 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR2884643 Sensitive lineage4.1.2.1 es
SRR1180355 Sensitive lineage4.9 None
ERR1336823 Sensitive La3;M.canetti None
ERR266121 Sensitive M.canetti None
SRR24061599 Sensitive M.canetti None
SRR24061600 Sensitive M.canetti None
ERR266122 Sensitive La3;M.canetti None
ERR4818347 Other lineage4.1.2 None
SRR1181325 Sensitive lineage4.9 None
ERR551179 Sensitive M.canetti None
SRR1180406 Sensitive lineage4.9 None
ERR2514477 Sensitive lineage4.1.2.1 gb
ERR3597001 Sensitive M.canetti None
ERR1336822 Sensitive M.canetti None
SRR1181403 Other lineage4.9 None
ERR2884652 Sensitive lineage4.1.2.1 None
ERR9121191 Sensitive lineage4.1.2.1 None
ERR3283028 Other La3;lineage4 None
ERR552304 Sensitive M.canetti None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR266107 Other M.canetti None
ERR3797048 Other La3;lineage4.9 None
ERR3597002 Other M.canetti None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3597006 Other La3;M.canetti None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR266106 Sensitive M.canetti None
SRR5818653 Sensitive M.canetti dj
SRR1180319 Sensitive lineage4.9 None
ERR2884671 Sensitive lineage4.1.2.1 es
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4596910 Sensitive lineage4.9 None
ERR2884626 Sensitive lineage4.1.2.1 es
SRR7070600 Sensitive lineage4.1.2.1 None
SRR5818676 Other M.canetti dj
ERR1336821 Sensitive La3;M.canetti None
ERR3797065 RR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR9121462 Sensitive lineage4.1.2.1 None
SRR28170812 Sensitive M.canetti None
SRR5818605 Other M.canetti None
SRR1181351 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR1043163 Other La3;M.canetti None
SRR25827682 Other None
ERR4817181 Sensitive M.canetti None
SRR29748661 Sensitive lineage4.1.2.1 None
ERR369156 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR3597003 Sensitive M.canetti None
ERR3797087 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR22179528 Sensitive M.canetti None
SRR1180410 Sensitive lineage4.9 None
ERR3597005 Sensitive M.canetti None
SRR21689690 Sensitive lineage4.1.2.1 None
ERR313116 Sensitive M.canetti None
ERR4819927 Sensitive M.canetti None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4821046 Sensitive M.canetti None
ERR3994107 Sensitive lineage4.1.2.1 None
ERR2884634 Sensitive lineage4.1.2.1 es
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR5818567 Other M.canetti dj
ERR502474 RR-TB lineage4.9 None
SRR16058668 Sensitive M.canetti None
SRR1180946 Sensitive lineage2;lineage4.9 None