Rv3596c - c.1005C>T
Drug resistance types
123 Sensitive
2 RR-TB
3 HR-TB
1 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| M.canetti | 66 |
| lineage4.9 | 42 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 21 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La3;M.canetti | 10 |
| M.canetti;lineage4.9 | 2 |
| 2 | |
| La2;M.canetti | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage4 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage4.9 | 8 |
| lineage4 | 1 |
| La1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage6.1.3 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 167 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786076 | Sensitive | lineage3 | None | ERR313114 | Sensitive | M.canetti | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | ERR266121 | Sensitive | M.canetti | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR551179 | Sensitive | M.canetti | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4821046 | Sensitive | M.canetti | None | ERR2884652 | Sensitive | lineage4.1.2.1 | None | ERR9121191 | Sensitive | lineage4.1.2.1 | None | SRR1238559 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR5818614 | Sensitive | M.canetti | dj | SRR10177261 | Sensitive | M.canetti | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR266110 | Other | M.canetti | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | SRR16156775 | Other | lineage4.9 | None | ERR3597002 | Other | M.canetti | None | ERR9121483 | Sensitive | lineage4.1.2.1 | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR26159043 | Other | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR551057 | Other | M.canetti | None | SRR21690151 | Sensitive | lineage4.1.2.1 | None | SRR18289195 | Sensitive | M.canetti | None | SRR5818653 | Sensitive | M.canetti | dj | ERR2884671 | Sensitive | lineage4.1.2.1 | es | SRR1180977 | Sensitive | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR11067261 | Sensitive | lineage4.1.2.1 | None | SRR10177263 | Sensitive | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1336821 | Sensitive | La3;M.canetti | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | ERR552306 | Sensitive | M.canetti;lineage4.9 | None | ERR12544076 | Sensitive | lineage4.1.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR25827682 | Other | None | ERR4817181 | Sensitive | M.canetti | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR3994097 | Sensitive | lineage4.1.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR22179528 | Sensitive | M.canetti | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR21689690 | Sensitive | lineage4.1.2.1 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR4796577 | HR-TB | None | ERR2884669 | Sensitive | lineage4.1.2.1 | es | SRR1180406 | Sensitive | lineage4.9 | None | ERR2514477 | Sensitive | lineage4.1.2.1 | gb | ERR3597001 | Sensitive | M.canetti | None | ERR3994107 | Sensitive | lineage4.1.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR552304 | Sensitive | M.canetti | None | ERR369151 | Other | lineage4.9 | None | SRR5818567 | Other | M.canetti | dj | ERR3597004 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR16058668 | Sensitive | M.canetti | None | ERR266107 | Other | M.canetti | None | ERR551055 | Sensitive | M.canetti | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4815361 | Other | M.canetti | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR266108 | Sensitive | M.canetti | None | ERR313113 | Other | M.canetti | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR313115 | Other | M.canetti | None | SRR11662694 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3597006 | Other | La3;M.canetti | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR266106 | Sensitive | M.canetti | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR1180319 | Sensitive | lineage4.9 | None | ERR9121236 | Sensitive | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4769552 | Sensitive | La1.3 | None | ERR9125475 | Other | M.canetti | None | SRR10177258 | Other | M.canetti | None | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR5818676 | Other | M.canetti | dj | SRR24061598 | Sensitive | M.canetti | None | SRR10177260 | Other | M.canetti | None | ERR266124 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR9121293 | Sensitive | lineage4.1.2.1 | None | SRR10177262 | Sensitive | M.canetti | None | ERR1043163 | Other | La3;M.canetti | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | ERR1336823 | Sensitive | La3;M.canetti | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR3597005 | Sensitive | M.canetti | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR1336822 | Sensitive | M.canetti | None | SRR1181403 | Other | lineage4.9 | None | ERR2884634 | Sensitive | lineage4.1.2.1 | es | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6650709 | Sensitive | M.canetti | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR551056 | Sensitive | M.canetti | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR552307 | Sensitive | M.canetti | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR9125480 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR3597007 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816019 | Sensitive | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | ERR2884626 | Sensitive | lineage4.1.2.1 | es | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR7070600 | Sensitive | lineage4.1.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR9121462 | Sensitive | lineage4.1.2.1 | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR2884661 | Sensitive | lineage4.1.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR551180 | Sensitive | M.canetti | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR29748661 | Sensitive | lineage4.1.2.1 | None | ERR2884643 | Sensitive | lineage4.1.2.1 | es |
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