Rv3596c - c.885T>C


Drug resistance types
37 Sensitive 13 RR-TB 84 HR-TB 10 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 65 Other
lineage Counts
lineage Count
lineage4.9 30
109
lineage4 10
lineage2.2.1 20
lineage5.2 2
lineage2.2.2 2
lineage4.2.1.1 1
lineage4.3.4.2.1 1
La2 1
lineage4.8 5
La1.8.1 1
lineage4.1.1 1
lineage6.1.1 2
lineage4.6.2.2 2
lineage4.9;La1.3 1
La1.2 1
lineage3.1.2 1
La1 1
lineage3 8
lineage2.2 3
lineage4.5 1
La3 1
lineage2.2.1.1 4
lineage4.3.2 3
lineage4.3.4.1 1
lineage4.4.2 2
lineage7;lineage2.2.1.2 1
lineage9;lineage3.1 1
lineage4.9;lineage4.6.3 1
lineage4.3 2
lineage4.1 1
lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 221
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2660539 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR5818605 Sensitive None
SRR5818685 Sensitive None
ERR4821214 RR-TB None
SRR6046141 Other lineage4.9 None
SRR6046152 Other lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6045053 Other None
SRR6045233 HR-TB None
SRR6045217 Other lineage4 None
SRR6046210 Other lineage4 None
SRR6046046 Other None
SRR6045399 Other None
SRR6045327 HR-TB None
SRR6046362 HR-TB None
SRR6046225 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046492 Other None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046397 Other None
SRR6046482 HR-TB None
SRR6046460 HR-TB None
SRR6046824 HR-TB None
SRR6046644 HR-TB None
SRR6046839 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR6046878 HR-TB lineage4 None
ERR294266 HR-TB None
ERR4831117 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR4831727 MDR-TB lineage2.2.2 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR502524 HR-TB La2 None
ERR502889 Other None
ERR323039 HR-TB None
SRR9971122 MDR-TB lineage4.8 None
ERR323053 HR-TB None
ERR3597001 Sensitive None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034652 Other None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3468488 RR-TB La1.8.1 None
ERR3597003 Sensitive None
ERR067681 HR-TB None
ERR133986 HR-TB None
ERR3283024 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3597005 Sensitive None
ERR3597002 Sensitive None
ERR3597007 Sensitive None
ERR3597006 Sensitive None
ERR3797015 HR-TB None
ERR3994095 HR-TB lineage4.1.1 None
ERR3797014 Other None
ERR3797046 HR-TB None
ERR3797044 Other None
ERR3797061 Other None
ERR3799304 Other lineage6.1.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR387051 HR-TB None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4769419 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4769452 HR-TB None
ERR4796577 MDR-TB None
ERR4769472 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4798504 Other lineage3 None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR702404 HR-TB None
ERR6359045 HR-TB None
ERR6358991 HR-TB None
ERR736865 HR-TB None
ERR736839 Other None
ERR736835 HR-TB None
ERR7451301 Sensitive None
ERR7451300 Sensitive None
ERR9119500 MDR-TB lineage5.2 None
ERR752229 Other lineage4.5 None
ERR9125480 Sensitive None
ERR9787014 Other lineage6.1.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9896144 Other lineage3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1169306 Other None
SRR1169249 Other La3 None
SRR1167384 Other lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR1172214 HR-TB lineage4.9 None
SRR1172310 HR-TB None
SRR1173281 RR-TB lineage3 None
SRR1180172 Other lineage2.2.1 None
SRR1174897 HR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR14164739 Other lineage4.3.2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR14164434 Sensitive lineage4.3.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR14164538 Sensitive lineage4.3.2 None
SRR17658565 Other lineage3 None
SRR16058668 Sensitive None
SRR14782405 HR-TB None
SRR15316595 RR-TB lineage4.4.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR22424787 Sensitive lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR22179528 Sensitive None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR24061597 Sensitive None
SRR24061600 Sensitive None
SRR24061598 Sensitive None
SRR24061599 Sensitive None
SRR8692790 RR-TB lineage4 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR8692905 HR-TB None
SRR8692822 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692887 Other None
SRR3675270 HR-TB None
ERR176751 HR-TB None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR158583 HR-TB None
ERR4815361 Sensitive None
SRR3675234 Other None
ERR176568 Other lineage4.3 None
ERR176643 HR-TB None
SRR3675280 HR-TB lineage4.9 None
SRR3675284 HR-TB lineage4.9 None
ERR176740 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR4815556 RR-TB lineage3 None
ERR2228942 Sensitive lineage4.8 None
SRR3675456 HR-TB None
ERR4816019 Sensitive None
SRR3675510 Other None
ERR212033 HR-TB None
ERR4816151 Other lineage4.8 None
SRR3675550 Other None
SRR3675555 HR-TB None
ERR4816322 Other lineage4.9 None
ERR4817069 RR-TB None
ERR4816466 HR-TB None
ERR212121 HR-TB None
SRR3675574 HR-TB None
ERR4816470 Other lineage3 None
ERR216965 HR-TB lineage4.9 None
SRR3675571 HR-TB None
ERR4817181 Sensitive None
ERR4816852 Other lineage4.9 None
ERR4816656 HR-TB None
SRR5818653 Sensitive dj
ERR2446566 Other lineage4.1 None
ERR234659 HR-TB None
SRR5818661 Sensitive dj
SRR5818614 Sensitive dj
SRR5818668 Sensitive dj
SRR5818652 Sensitive dj
SRR5818567 Sensitive dj
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818929 HR-TB None
ERR3275941 RR-TB lineage4.3 nl
ERR3275709 HR-TB lineage3 nl
ERR4820705 Sensitive lineage4.9 None
SRR5341418 Other None
ERR2514327 HR-TB lineage4.8 None
ERR4819927 Sensitive None
ERR2514821 Other lineage2.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR2514692 Other None
SRR5341330 HR-TB None
ERR2693231 Other None
ERR2693232 Other lineage4.9 None
ERR2693238 HR-TB lineage4.9 None
SRR6045526 HR-TB None
ERR4821057 HR-TB lineage4 None
ERR4821046 Sensitive None
ERR2693230 Other None
ERR2693254 Other None
SRR5341470 HR-TB None
ERR2693257 Other None
SRR6045519 HR-TB None