Rv3246c - c.-490T>C
Drug resistance types
68 Sensitive
2 RR-TB
12 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 66 |
| lineage1.1.2 | 1 |
| La3;M.canetti | 11 |
| lineage4.1.2.1 | 5 |
| lineage4.3.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.1 | 4 |
| lineage2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La2;M.canetti | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| La1.8.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | ERR551182 | Sensitive | M.canetti | None | ERR5908246 | Sensitive | lineage1.1.2 | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR22461617 | HR-TB | lineage4.1.2.1 | None | SRR10177262 | Sensitive | M.canetti | None | SRR22461669 | HR-TB | lineage4.3.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR13289695 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR22179528 | Sensitive | M.canetti | None | ERR313114 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR14296152 | Other | La1.8.1 | None | SRR5818567 | Other | M.canetti | dj | SRR16058668 | Sensitive | M.canetti | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR266107 | Other | M.canetti | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815361 | Other | M.canetti | None | ERR266110 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | ERR552307 | Sensitive | M.canetti | None | ERR551057 | Other | M.canetti | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | SRR5818661 | Other | M.canetti | dj | ERR1336821 | Sensitive | La3;M.canetti | None | ERR266124 | Other | M.canetti | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1043163 | Other | La3;M.canetti | None | ERR3275170 | Sensitive | lineage4.1.2.1 | nl | ERR4817181 | Sensitive | M.canetti | None | ERR3597003 | Sensitive | M.canetti | None | ERR4821152 | Sensitive | lineage3.1.2 | gb | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | SRR30182384 | Sensitive | lineage2.2.1 | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR3597001 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | ERR4816638 | Sensitive | lineage4.4.1.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR551055 | Sensitive | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | ERR266108 | Sensitive | M.canetti | None | ERR313113 | Other | M.canetti | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR313115 | Other | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | ERR4827469 | Sensitive | lineage2.2.1 | None | SRR18289195 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | ERR551181 | Sensitive | M.canetti | None | ERR7451300 | Sensitive | M.canetti | None | SRR16058674 | Other | M.canetti | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | SRR1792445 | Other | La1.7.1 | None | SRR24061598 | Sensitive | M.canetti | None | SRR29050859 | Other | lineage4.9 | None | ERR552306 | Sensitive | M.canetti;lineage4.9 | None | SRR10177260 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR551180 | Sensitive | M.canetti | None | ERR2446574 | Sensitive | lineage4.1.2.1 | nl | ERR1336823 | Sensitive | La3;M.canetti | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | ERR266121 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | ERR266123 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR552304 | Sensitive | M.canetti | None | ERR3597004 | Sensitive | M.canetti | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR10522763 | Sensitive | M.canetti | None | ERR4814984 | Sensitive | lineage4.1.2.1 | gb | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5818614 | Sensitive | M.canetti | dj | SRR10177261 | Sensitive | M.canetti | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR551056 | Sensitive | M.canetti | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR6045245 | Pre-XDR-TB | lineage2.2.1 | gb | SRR10522783 | Sensitive | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | ERR266106 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5818653 | Sensitive | M.canetti | dj | ERR3597007 | Sensitive | M.canetti | None | SRR21798461 | Sensitive | lineage4.8 | None | ERR266109 | Sensitive | M.canetti | None |
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