Rv3246c - c.-490T>C

Drug resistance types
26 Sensitive 2 RR-TB 12 HR-TB 5 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
M.canetti 66
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.1.2.1 5
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti 11
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 3
lineage2.1 1
lineage3.1.2 1
lineage2.2.1 2
M.canetti;lineage4.9 1
lineage4.8 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.8.1 1
lineage4.3.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
La2;M.canetti 1
lineage4.4.1.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7.1 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;lineage2 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 113
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10177261 Other M.canetti None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR22461617 HR-TB lineage4.1.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR266109 Other M.canetti None
ERR266107 Other M.canetti None
ERR3597001 Other M.canetti None
ERR1336824 Sensitive La3;M.canetti None
SRR10522783 Sensitive M.canetti None
SRR5818652 Other M.canetti dj
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5818668 Other M.canetti dj
ERR4821152 Sensitive lineage3.1.2 gb
SRR5818614 Other M.canetti dj
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR266121 Other M.canetti None
ERR3597006 Other La3;M.canetti None
ERR551057 Other M.canetti None
ERR4827469 Sensitive lineage2.2.1 None
ERR552306 Other M.canetti;lineage4.9 None
SRR10177262 Other M.canetti None
ERR551180 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
SRR21798461 Sensitive lineage4.8 None
ERR9125475 Other M.canetti None
SRR5818685 Other M.canetti None
SRR24061598 Other M.canetti None
ERR266122 Other La3;M.canetti None
SRR5818661 Other M.canetti dj
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR551056 Other M.canetti None
SRR6650709 Other M.canetti None
ERR7451301 Other M.canetti None
ERR266124 Other M.canetti None
ERR1043164 Other La3;M.canetti None
SRR5818605 Other M.canetti None
ERR7451300 Sensitive M.canetti None
SRR14296152 Other La1.8.1 None
ERR551179 Sensitive M.canetti None
SRR22179528 Other M.canetti None
SRR28170812 Other M.canetti None
SRR22461669 HR-TB lineage4.3.3 None
SRR18289196 Other M.canetti None
SRR6045245 Pre-XDR-TB lineage2.2.1 gb
ERR1336821 Sensitive La3;M.canetti None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR24061600 Other M.canetti None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR552304 Other M.canetti None
ERR266110 Other M.canetti None
ERR266126 Other La2;M.canetti None
ERR4819927 Other M.canetti None
SRR10177259 Other M.canetti None
ERR4821046 Other M.canetti None
ERR3597002 Other M.canetti None
ERR266120 Other M.canetti None
ERR9125480 Other M.canetti None
ERR1336825 Sensitive La3;M.canetti None
ERR4816638 Sensitive lineage4.4.1.1 None
ERR4816019 Other M.canetti None
ERR3597007 Other M.canetti None
ERR4817181 Other M.canetti None
ERR1336822 Sensitive M.canetti None
ERR1336820 Sensitive La3;M.canetti None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1792445 Other La1.7.1 None
ERR3275170 Sensitive lineage4.1.2.1 nl
SRR18289195 Sensitive M.canetti None
ERR2446574 Sensitive lineage4.1.2.1 nl
ERR3597004 Sensitive M.canetti None
ERR266125 Other La3;M.canetti None
ERR266106 Other M.canetti None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR3597003 Other M.canetti None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR5818567 Other M.canetti dj
SRR10522763 Sensitive M.canetti None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR16058668 Other M.canetti None
ERR266123 Other M.canetti None
ERR4815361 Other M.canetti None
ERR3597005 Other M.canetti None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR551055 Other M.canetti None
ERR552307 Other M.canetti None
ERR313113 Other M.canetti None
ERR313116 Other M.canetti None
SRR24061597 Sensitive M.canetti None
SRR24061599 Other M.canetti None
ERR313115 Other M.canetti None
ERR313117 Other M.canetti None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5818653 Other M.canetti dj
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR552305 Other M.canetti None
ERR551182 Sensitive M.canetti None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR551181 Sensitive M.canetti None
SRR16058674 Other M.canetti None
ERR313114 Other M.canetti None
SRR10177258 Other M.canetti None
SRR7131134 Sensitive lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4814984 Sensitive lineage4.1.2.1 gb
ERR1043163 Other La3;M.canetti None
ERR266108 Other M.canetti None
SRR10177260 Other M.canetti None
ERR5908246 Sensitive lineage1.1.2 None
ERR1336826 Sensitive La3;M.canetti None