TB-Profiler
Home
Upload
SRA data
Rv3246c
- c.-490T>C
Drug resistance types
70 Sensitive
2 RR-TB
11 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
M.canetti
67
La3;M.canetti
11
lineage2.2.1
5
lineage4.1.2.1
5
lineage2.1;lineage4.9;lineage6.3
2
La3;lineage2.1;lineage4.9;lineage6.3
2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
M.canetti;lineage4.2;lineage4.9
1
La3;lineage2
1
La1.8.1
1
Showing 1 to 10 of 31 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
117
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1043163
Other
La3;M.canetti
None
ERR1043164
Other
La3;M.canetti
None
ERR13289489
Sensitive
lineage2.2.1
None
ERR13289695
Pre-XDR-TB
lineage2.2.1
None
ERR1336820
Sensitive
La3;M.canetti
None
ERR1336821
Sensitive
La3;M.canetti
None
ERR1336822
Sensitive
M.canetti
None
ERR1336823
Sensitive
La3;M.canetti
None
ERR1336824
Sensitive
La3;M.canetti
None
ERR1336825
Sensitive
La3;M.canetti
None
Showing 1 to 10 of 117 entries
Previous
1
2
3
4
5
…
12
Next