Rv3596c - c.615T>C
Drug resistance types
41 Sensitive
34 RR-TB
33 HR-TB
25 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.3 | 1 |
| lineage4.9 | 29 |
| 65 | |
| lineage3.1.1 | 2 |
| lineage2.2.1 | 15 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8 | 6 |
| lineage3 | 8 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.2 | 1 |
| lineage1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.1.1 | 1 |
| La1.8.1 | 3 |
| lineage4.3.3 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 177 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769517 | Other | La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6336753 | RR-TB | lineage1.2.1.2.1 | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR7451300 | Sensitive | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR736835 | HR-TB | None | ERR7451301 | Sensitive | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9125480 | Sensitive | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1173310 | MDR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16058668 | Sensitive | None | SRR16156775 | Other | lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21675425 | HR-TB | lineage4.8 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR2101755 | Sensitive | lineage4.4.1.1.1 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR24061597 | Sensitive | None | SRR24061599 | Sensitive | None | SRR22179528 | Sensitive | None | SRR24061598 | Sensitive | None | SRR24061600 | Sensitive | None | SRR3675488 | HR-TB | None | ERR176751 | HR-TB | None | SRR3085281 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815361 | Sensitive | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675222 | Other | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675234 | Other | None | SRR3675501 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816019 | Sensitive | None | SRR3732583 | HR-TB | lineage4.1.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817181 | Sensitive | None | ERR212121 | HR-TB | None | SRR4034383 | HR-TB | lineage4.1.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5818661 | Sensitive | dj | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | SRR5818653 | Sensitive | dj | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | SRR5818567 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818652 | Sensitive | dj | ERR4818261 | Other | lineage1.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5818676 | Sensitive | dj | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819927 | Sensitive | None | ERR1023509 | Other | None | ERR4820030 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341456 | Other | None | ERR4821796 | Other | lineage4.1.1 | None | ERR2693231 | Other | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2693230 | Other | None | SRR5431730 | Other | La1.8.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821046 | Sensitive | None | ERR4821214 | RR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6046225 | HR-TB | None | SRR6046152 | Other | lineage4.9 | None | SRR5818605 | Sensitive | None | SRR5818685 | Sensitive | None | SRR6044890 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4829238 | Sensitive | lineage3 | None | ERR4830353 | Other | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7131160 | Sensitive | lineage3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982250 | Sensitive | lineage4.4.1.1.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR8217918 | HR-TB | None | ERR3283032 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1034652 | Other | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3283041 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3597003 | Sensitive | None | ERR3597006 | Sensitive | None | ERR3597005 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3597007 | Sensitive | None | ERR3797014 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None |
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