Rv3596c - c.615T>C


Drug resistance types
41 Sensitive 34 RR-TB 33 HR-TB 25 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 35 Other
lineage Counts
lineage Count
lineage4.9 29
65
lineage3 8
lineage4.4.1.1.1 2
lineage4.1.1.3 1
lineage4.3.3 3
lineage4.2.1.1 1
lineage5.1.1 1
lineage4.3.4.2.1 5
lineage4.8 6
lineage4 3
lineage4.4.1.2 1
La1.8.1 3
La1.3 1
lineage2.2.1 15
lineage1.2.1.2.1 1
lineage3.1.1 2
lineage4.6.1.2 5
lineage4.8;lineage4.3.3 3
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.3.2.1 1
lineage4.3.4.1 1
lineage4.4.2 2
lineage4.2.1 1
lineage7;lineage2.2.1.2 1
lineage2.2 1
lineage9;lineage3.1 1
lineage2.2.1.1 1
lineage3.1.2.1 1
lineage4.1.2.1 3
lineage4.1.2 1
lineage1 1
lineage4.4.1.1 1
lineage1.1.2 1
lineage4.1.1.3.1 2
lineage4.8.2 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 177
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046152 Other lineage4.9 None
SRR5818685 Sensitive None
SRR5818605 Sensitive None
ERR4830353 Other None
SRR6046225 HR-TB None
SRR6046299 HR-TB None
ERR4829238 Sensitive lineage3 None
SRR6044890 Other lineage4.9 None
SRR6982250 Sensitive lineage4.4.1.1.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6785281 Other lineage4.2.1.1 None
SRR7131160 Sensitive lineage3 None
ERR502517 MDR-TB lineage5.1.1 None
SRR7585435 Other lineage4.9 None
SRR8217918 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971122 MDR-TB lineage4.8 None
ERR3283006 RR-TB lineage4.9 None
ERR1023525 HR-TB lineage4 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR323068 Sensitive lineage4.9 None
ERR1034652 Other None
ERR3445504 HR-TB None
ERR3283032 HR-TB None
ERR3283024 Other None
ERR3283041 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3597006 Sensitive None
ERR3468488 RR-TB La1.8.1 None
ERR3597003 Sensitive None
ERR3597001 Sensitive None
ERR3597005 Sensitive None
ERR3597002 Sensitive None
ERR3597007 Sensitive None
ERR4769553 RR-TB lineage4.9 None
ERR3797017 Other None
ERR3797044 Other None
ERR3797014 Other None
ERR3797062 RR-TB lineage4.9 None
ERR3797061 Other None
ERR4769517 Other La1.3 None
ERR4796577 MDR-TB None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799025 Pre-XDR-TB None
ERR5987263 MDR-TB lineage2.2.1 None
ERR7451300 Sensitive None
ERR736835 HR-TB None
ERR6336753 RR-TB lineage1.2.1.2.1 None
ERR6358991 HR-TB None
ERR702404 HR-TB None
ERR7451301 Sensitive None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9125480 Sensitive None
SRR10315751 MDR-TB lineage4.8 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049672 Other lineage3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173170 Other lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140736 RR-TB None
SRR1173310 MDR-TB None
SRR1173515 HR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173770 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1196545 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR14782405 HR-TB None
SRR16058668 Sensitive None
SRR14782539 MDR-TB lineage4.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR16156188 HR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156832 RR-TB None
SRR16156804 RR-TB lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18572454 RR-TB lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19303820 RR-TB lineage4.8 None
SRR18910194 HR-TB lineage2.2 None
SRR24061600 Sensitive None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR21675425 HR-TB lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR22424787 Sensitive lineage4.9 None
SRR24061597 Sensitive None
SRR24061599 Sensitive None
SRR2101755 Sensitive lineage4.4.1.1.1 None
SRR22179528 Sensitive None
SRR24061598 Sensitive None
SRR8692879 HR-TB lineage4.9 None
ERR176751 HR-TB None
SRR3675222 Other None
SRR3085281 Pre-XDR-TB lineage2.2.1 None
ERR4815361 Sensitive None
SRR3675488 HR-TB None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675234 Other None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4817181 Sensitive None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR3675501 HR-TB None
ERR4815079 RR-TB lineage3 None
ERR4816019 Sensitive None
ERR212121 HR-TB None
SRR3732583 HR-TB lineage4.1.2.1 None
ERR2229198 MDR-TB lineage4.8 None
SRR4034383 HR-TB lineage4.1.2 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR5818668 Sensitive dj
ERR4817915 RR-TB lineage4.9 None
ERR4818126 RR-TB lineage1 None
SRR5818653 Sensitive dj
SRR5818661 Sensitive dj
ERR4818851 RR-TB lineage4.4.1.1 None
SRR5818614 Sensitive dj
SRR5818567 Sensitive dj
SRR5818652 Sensitive dj
SRR5818676 Sensitive dj
ERR4818261 Other lineage1.1.2 None
ERR4818536 Other lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4819198 Other lineage2.2.1 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4820256 Other lineage2.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4819462 Other lineage4 None
ERR2693230 Other None
ERR1023509 Other None
SRR5341456 Other None
ERR4821796 Other lineage4.1.1 None
ERR4821811 RR-TB lineage4.9 None
ERR2693231 Other None
ERR4819927 Sensitive None
ERR4820030 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5431730 Other La1.8.1 None
ERR4821046 Sensitive None
ERR4821143 RR-TB lineage4.9 None
ERR2693254 Other None
ERR4821172 RR-TB lineage4.9 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR2693257 Other None
SRR6045519 HR-TB None
ERR4821214 RR-TB None