lineage | Count |
---|---|
La3;M.canetti | 9 |
lineage3 | 1 |
lineage4.9 | 16 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
lineage4.8 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.1.2 | 1 |
La3;M.canetti;lineage4.9 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
lineage4.9;lineage7 | 1 |
La1.6 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
M.canetti | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage4.2;lineage4.9 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 40 |
ID | Drug resistance | Lineage | Country iso2 | ERR1336824 | Sensitive | La3;M.canetti | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3597006 | Other | La3;M.canetti | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR11268038 | Other | La1.6 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR266125 | Other | La3;M.canetti | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR266124 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | SRR6045555 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3283040 | HR-TB | lineage4.9 | None |
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