Rv0486 - c.318G>C
Drug resistance types
37 Sensitive
1 RR-TB
88 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 2 |
| lineage2.2 | 3 |
| 119 | |
| lineage2.2.1 | 8 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4 | 5 |
| lineage4.9 | 15 |
| lineage4.1.2.1 | 4 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17658565 | Other | lineage3 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR24061599 | Sensitive | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR22179528 | Sensitive | None | SRR24061598 | Sensitive | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR24061600 | Sensitive | None | SRR21732253 | Sensitive | lineage2.2.1 | None | SRR24061597 | Sensitive | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675502 | Other | None | ERR1035239 | HR-TB | None | ERR4815361 | Sensitive | None | SRR3675482 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | ERR4816019 | Sensitive | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675234 | Other | None | SRR3675383 | HR-TB | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817181 | Sensitive | None | SRR5818661 | Sensitive | dj | ERR3275196 | Other | lineage2.2.1 | nl | SRR4035801 | Other | lineage4.1.2 | None | ERR1035162 | Other | None | SRR5818653 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818668 | Sensitive | dj | ERR2693231 | Other | None | SRR5818567 | Sensitive | dj | SRR5341418 | Other | None | ERR4819927 | Sensitive | None | SRR5341330 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5818676 | Sensitive | dj | SRR5818652 | Sensitive | dj | ERR1023509 | Other | None | ERR2693230 | Other | None | SRR5341470 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR4821046 | Sensitive | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | SRR6045519 | HR-TB | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR5818605 | Sensitive | None | SRR6046133 | HR-TB | None | SRR5818685 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR323036 | HR-TB | None | ERR323039 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR1034652 | Other | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3439432 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3597005 | Sensitive | None | ERR3468544 | HR-TB | None | ERR3597003 | Sensitive | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3597007 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3597006 | Sensitive | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769450 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR6359045 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR7451301 | Sensitive | None | ERR736865 | HR-TB | None | ERR7451300 | Sensitive | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR9125480 | Sensitive | None | ERR8976043 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1174897 | HR-TB | None | SRR10808805 | Sensitive | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR13837666 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861684 | Sensitive | lineage4.9 | None | SRR16058668 | Sensitive | None | SRR1640750 | HR-TB | None |
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