EBG00000313339 - n.2078T>C
Drug resistance types
12 Sensitive
5 RR-TB
11 HR-TB
2 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage4.9 | 32 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage6.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3 | 1 |
| lineage4.8 | 3 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR736831 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR9786076 | Other | lineage3 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | ERR4829208 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None |
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