EBG00000313339 - n.2078T>C
Drug resistance types
10 Sensitive
8 RR-TB
21 HR-TB
8 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 1 |
| lineage4.1.2.1 | 13 |
| lineage4.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4 | 8 |
| lineage4.9 | 35 |
| La1.8.1 | 1 |
| 1 | |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1 | 4 |
| lineage2.2.2 | 1 |
| lineage3 | 4 |
| lineage6 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.8 | 8 |
| lineage2.2.1.1 | 2 |
| lineage4.5 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.6.2.2 | 5 |
| lineage1.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796561 | Other | lineage4.3.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796599 | Other | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR736837 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9787336 | Other | lineage6 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815217 | Sensitive | lineage3 | gb | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR21576615 | Sensitive | lineage4.5 | None | ERR4815178 | Other | lineage4.8 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4816227 | RR-TB | lineage3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814911 | Other | lineage4.3.3 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4817349 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816231 | Other | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR2229410 | Sensitive | lineage4.8 | None | ERR4817709 | HR-TB | lineage4.6.2.2 | gb | ERR4817703 | Other | lineage1.1.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | SRR4035764 | HR-TB | lineage4.1.2 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818797 | Other | lineage4.5 | None | ERR2515055 | Other | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818249 | Other | lineage4.1.2.1 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4817645 | Other | lineage4.8 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819462 | Other | lineage4 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR2179699 | Other | lineage4.4.2 | cn | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821940 | Other | lineage4.9 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821332 | Other | lineage4.1.2.1 | gb | ERR4821372 | Other | lineage4.1.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046385 | Other | lineage4.9 | None | SRR6044884 | Other | lineage3.1.1 | gb | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046737 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None |
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