ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
SRR1166821
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11465189
|
RR-TB
|
lineage4.9.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR11465333
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR3675545
|
Other
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR2693242
|
RR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
SRR12708371
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR3675269
|
RR-TB
|
lineage4.9
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR4813275
|
Sensitive
|
lineage4.1.2.1
|
pe
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR3675487
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR28119827
|
Other
|
La3;lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|