Rv3596c - c.912C>G


Drug resistance types
151 Sensitive 12 RR-TB 114 HR-TB 21 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 104 Other
lineage Counts
lineage Count
lineage2.2.1 25
lineage4.3.3 3
lineage3.1.1 1
lineage4.9 101
lineage4.5 3
101
lineage7;lineage2.2.1.2 1
lineage3 7
La1.8.1 5
lineage2.2 6
La1.7.1 1
lineage4 91
lineage4.1 4
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.1.1.3 3
lineage3;lineage2.1 1
lineage2.1 2
lineage1.2.1.1 1
lineage4.1.1 1
lineage4;lineage1.1.2 1
lineage4.1.2.1 10
lineage4.1.1.2 1
lineage5.1.4 1
lineage4.2.1 3
lineage4.3.4.2.1 2
lineage4.3.2.1 3
lineage4.6.2.2 1
lineage1.1.2 2
lineage4.9;lineage2.1 1
lineage2.2.1.1 2
lineage1.1 1
lineage1.1.1.1 1
lineage3.1 2
lineage4.7 1
lineage4.1.2 2
lineage4.8 2
lineage4.8.1 1
lineage4.9.1 1
La1 1
lineage5.1.2 1
La1.3 5
La1.2 1
lineage4.9;La1.3 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage4.3.4.2 1
lineage6.1.3 1
lineage4.8;lineage4.3.3 2
lineage2.2.1.2 1
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2 1
spoligotype Counts
spoligotype Count
None 415
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR12830387 Sensitive lineage4.3.3 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13861500 RR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13861304 Other lineage4.9 None
SRR13837507 HR-TB lineage4.9 None
SRR13861324 Other lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861636 Sensitive lineage4.9 None
SRR13861575 Other lineage4.9 None
SRR14782405 HR-TB None
SRR16157123 Other lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR1640750 HR-TB None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR17658565 Other lineage3 None
SRR1791696 Other La1.8.1 None
SRR1791747 Other La1.8.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR21469201 Other La1.7.1 None
SRR3675455 Sensitive lineage4 None
SRR12708416 Sensitive lineage4.1 None
SRR3675473 Sensitive lineage4.9 None
ERR176779 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675472 Sensitive lineage4.9 None
ERR176778 HR-TB None
ERR158583 HR-TB None
SRR3675477 Other lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3675486 HR-TB None
SRR3675488 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675222 Other None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR702405 Sensitive lineage2.1 None
SRR3675229 Other lineage4 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675249 Sensitive lineage4.9 None
SRR3675246 Sensitive lineage4 None
SRR3675265 Other lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675270 HR-TB None
SRR3675279 Other None
SRR3675387 Sensitive None
SRR3675283 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
ERR176651 HR-TB None
SRR3675318 Other lineage4.9 None
SRR3675501 HR-TB None
ERR181887 HR-TB None
SRR3675383 HR-TB None
SRR3675502 Other None
ERR4816964 Other lineage4.9 None
ERR212125 HR-TB lineage4 None
SRR3675522 Other None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675545 HR-TB None
SRR3675550 Other None
SRR3675514 Sensitive lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
SRR3675547 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675548 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
ERR212001 HR-TB None
SRR3675558 HR-TB None
SRR3675577 Sensitive lineage4.9 None
ERR4816470 Other lineage3 None
ERR4817998 Other lineage3 None
ERR216965 HR-TB lineage4.9 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4818710 Sensitive lineage4.9 None
ERR4817915 RR-TB lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR2446566 Other lineage4.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR3275196 Other lineage2.2.1 nl
ERR2513283 Other lineage5.1.4 None
ERR2512770 Other lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818536 Other lineage4.9 None
SRR5341366 Sensitive lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341461 Sensitive lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819462 Other lineage4 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341425 Other lineage4 None
SRR5341418 Other None
SRR5341437 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR5341330 HR-TB None
SRR5341323 Sensitive lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR5341456 Other None
SRR5341467 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2446563 Other lineage2.2.1 nl
ERR2693238 HR-TB lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
SRR5431730 Other La1.8.1 None
SRR6045519 HR-TB None
ERR4821053 Other lineage3 None
SRR6045503 HR-TB None
ERR2693239 HR-TB None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
ERR4821486 Other lineage2.2 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6045892 Sensitive None
SRR6045706 Sensitive lineage4 None
SRR6044819 Sensitive lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6325447 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6325442 HR-TB None
SRR6046362 HR-TB None
SRR6325444 HR-TB None
SRR6046482 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046245 Other lineage4.9 None
SRR6046299 HR-TB None
ERR278594 HR-TB None
ERR2851356 Sensitive lineage4.9 None
SRR6046460 HR-TB None
SRR6046492 Other None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046824 HR-TB None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6046878 HR-TB lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR323036 HR-TB None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6046897 Sensitive lineage4 None
SRR6511621 HR-TB None
ERR3077978 Other lineage1.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR4831638 Sensitive None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831716 HR-TB lineage1.1.1.1 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR502889 Other None
ERR323034 HR-TB lineage3.1 None
ERR294248 HR-TB None
ERR4813275 Sensitive lineage4.1.2.1 pe
ERR5311090 HR-TB None
ERR502943 HR-TB None
SRR7496523 Other lineage4.7 None
ERR5311081 HR-TB None
SRR7496471 Sensitive None
ERR5311099 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
ERR323063 HR-TB None
SRR9971150 RR-TB lineage4.8.1 None
ERR323038 HR-TB None
ERR323041 HR-TB None
ERR323055 HR-TB None
SRR9971112 Other lineage2.2.1 None
SRR7796666 Pre-XDR-TB lineage2.2.1 None
ERR323054 HR-TB lineage3.1 None
ERR323066 Sensitive lineage4 None
ERR1034652 Other None
ERR11465189 RR-TB lineage4.9.1 None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR323085 Sensitive lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1063855 Other lineage4 None
ERR1035122 Sensitive None
ERR1063859 HR-TB None
ERR133825 Sensitive lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR133986 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR3445504 HR-TB None
ERR3283017 HR-TB None
ERR3283040 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3468544 HR-TB None
ERR3445503 HR-TB None
ERR3468488 RR-TB La1.8.1 None
ERR349265 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797083 HR-TB None
ERR3797015 HR-TB None
ERR3797046 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR4024991 Other None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR4178309 Other lineage4.1.2.1 None
ERR403298 HR-TB lineage4 None
ERR4178226 Sensitive lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4188350 HR-TB None
ERR473303 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769419 Other lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4769514 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769555 Other La1.3 None
ERR4797350 Sensitive lineage4.9 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4797184 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798431 HR-TB None
ERR4798099 Other None
ERR6358837 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4811030 Sensitive None
ERR5917710 Other lineage4.1.2.1 None
ERR4798406 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4811493 HR-TB None
ERR6358951 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6358979 Other None
ERR6359045 HR-TB None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6866022 Other None
ERR6865513 Other lineage4.1.2.1 None
ERR736834 Sensitive lineage4 None
ERR6866639 Other None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR736831 HR-TB lineage4.9 None
ERR8976043 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736835 HR-TB None
ERR736839 Other None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9786076 Sensitive lineage3 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR10315567 Other lineage2.2.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9787256 Other lineage6.1.3 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR10808805 Sensitive None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1158918 Sensitive lineage4 None
SRR1172717 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173568 Other lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175496 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1180250 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None