Rv0667 - c.3189G>C


Drug resistance types
54 Sensitive 43 RR-TB 56 HR-TB 54 MDR-TB 29 Pre-XDR-TB 2 XDR-TB 79 Other
lineage Counts
lineage Count
lineage6.1.3 3
lineage2.2.2 10
La2;lineage2.2 1
lineage2.2 2
lineage3.1.2.1 5
lineage4.9 75
lineage5.1.1 1
lineage2.2.1 70
lineage4.6.5 1
La3;lineage4.9 9
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.3 3
lineage4.3.4.2.1 4
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
lineage4.1.3 1
lineage2.1;lineage4.9 1
lineage4.1.1.1 2
lineage4 1
La1.7;lineage3.1;lineage4 1
La2 1
La3;lineage4.3.4 1
lineage4.1.2.1 2
lineage4.2.1 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage3 10
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage3.1.1 1
lineage4.9;lineage7 4
lineage4.8 9
La1.2 1
lineage4.3.3 5
lineage4.4.1.1.1 2
La1.7;lineage4.9 4
La1.2.BCG 3
lineage4.6 1
lineage4.3.4.1 2
lineage4.5 3
La1.6;La3;M.canetti;lineage4.2.2 1
La1.8.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.2.2.2 2
lineage1.1.1 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1.1 3
lineage4.6.1.1 1
lineage2.2.1;lineage2.2.2 1
La1.2.BCG;lineage4.9 1
lineage1.2.1.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.3.2.1 1
lineage4.6.4;lineage4.9 1
lineage4.4.1.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.3.4.2 1
lineage4.9;lineage9 1
lineage4.4.1.2 1
La1.4 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
lineage6.1.2 1
M.canetti;lineage4.2 1
La3;lineage4 1
lineage4.1.1.3.1 2
lineage2.2.2;lineage4 1
lineage1.1.2 2
lineage4.8.1 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage3.1.3 1
lineage2.2;lineage4.9 1
lineage3;lineage4 1
lineage4.4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.1.1 1
La1.7.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.3.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
1
lineage3.1;lineage9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 317
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787336 RR-TB lineage6.1.3 None
SRR1013577 HR-TB lineage2.2.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
ERR4815022 Other lineage3.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
ERR751336 Sensitive lineage5.1.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR7801175 HR-TB lineage4.6.5 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR1735596 RR-TB lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR12062525 Pre-XDR-TB lineage2.2.1 None
SRR3675446 RR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR10040284 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
ERR181887 Other lineage4.9 None
SRR3742667 Sensitive lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR1048987 HR-TB lineage2.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR4769521 RR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4798823 HR-TB lineage4 None
SRR1049674 HR-TB lineage2.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR3675582 Other lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3797081 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9285979 RR-TB lineage3.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR10040495 Pre-XDR-TB lineage2.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR7069097 Other lineage3.1.2.1 None
ERR2432997 Other lineage4.8 None
SRR6044835 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR7851312 Other La1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR212125 HR-TB lineage4.9 None
SRR5007165 Other lineage3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR27069408 Pre-XDR-TB lineage2.2.1 None
SRR27069407 MDR-TB lineage2.2.1 None
SRR6045795 Other lineage2.2.1 None
ERR6866807 RR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797087 Sensitive lineage4.9 None
SRR6044936 Other lineage4.6 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR7069319 Other lineage4.5 None
ERR4811520 Sensitive lineage2.2.1 cn
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR4769419 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR11462861 Other La1.8.1 None
SRR671748 MDR-TB lineage2.2.1 cn
ERR4816717 RR-TB lineage3.1.2.1 None
ERR926165 Other lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1140724 Other lineage2.2.1 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1723872 Pre-XDR-TB lineage2.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR926156 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR25206955 Pre-XDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR6832787 Other lineage2.2.1 None
ERR4819314 HR-TB lineage1.1.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4811607 Sensitive lineage2.2.1 cn
SRR5153091 HR-TB lineage4.3.3 None
ERR4811559 Sensitive lineage2.2.1 cn
SRR18002875 MDR-TB lineage2.2.2 None
SRR6045548 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR067712 Sensitive lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR11342682 Other lineage4.1.2 None
ERR9119669 MDR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR10315579 Other lineage2.2.1.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811292 Pre-XDR-TB lineage2.2.1 cn
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR25628598 Sensitive lineage2.2.1 None
ERR867526 MDR-TB lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
SRR10040541 MDR-TB lineage2.2.1 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR6046382 RR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR14801652 HR-TB lineage4.3.3 None
SRR3675280 RR-TB lineage4.9 None
ERR4811591 Sensitive lineage2.2.1 cn
ERR4814639 HR-TB lineage4.9 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR20969475 Other lineage1.2.1.2 None
ERR3275190 Other lineage3 nl
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR21031744 Sensitive lineage2.2.1 None
ERR2851356 Sensitive lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3797047 MDR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341293 Sensitive lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR18003042 Other lineage2.2.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR3283040 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4797588 MDR-TB lineage3 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR5311094 HR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR21277281 Pre-XDR-TB lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR16278274 Other La1.4 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR4817915 Other lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR6359082 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR18002947 MDR-TB lineage2.2.1 None
ERR4811630 Sensitive lineage2.2.1 cn
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR3283028 Other La3;lineage4 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR27069432 MDR-TB lineage2.2.1 None
ERR245675 Sensitive lineage1.1.2 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR4811318 MDR-TB lineage2.2.1 cn
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR15316430 Sensitive lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
ERR3797015 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR18913742 Sensitive lineage3.1.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR926157 Other lineage4.9 None
SRR6280295 Sensitive lineage2.2.1 cn
ERR4815550 Other lineage2.2;lineage4.9 None
ERR2446509 Other lineage3 nl
SRR3675230 Other lineage3;lineage4 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR3675284 Sensitive lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR11342686 MDR-TB lineage4.8 None
ERR4811628 Sensitive lineage2.2.1 cn
ERR978765 RR-TB lineage4.8 None
SRR18213736 Other lineage3 None
SAMN02360590 MDR-TB lineage2.2.2 None
SRR15315797 RR-TB lineage2.2.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6789621 Other lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR4810928 Pre-XDR-TB lineage2.2.1 cn
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
ERR4811558 Sensitive lineage2.2.1 cn
SAMN03246590 Pre-XDR-TB lineage2.2.1 cn
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR25206929 MDR-TB lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6046616 Other lineage4.3.1.1 None
ERR926163 Other lineage4.9 None
SRR1723873 Pre-XDR-TB lineage2.2.1 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5818672 Other lineage1.2.2.2 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1181289 RR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR7069518 Other lineage4.8 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR926164 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR6045424 Other lineage1.1.2 None
ERR9787153 Other lineage6.1.3 None
SRR6280183 Sensitive lineage2.2.1 cn
SRR1180137 RR-TB lineage2.2.1 None
SRR671793 Sensitive lineage2.2.1 cn
SRR10040176 Pre-XDR-TB lineage2.2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3803778 Other lineage6.1.3 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR926155 Other lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
SRR6044780 Sensitive lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045359 HR-TB lineage4.9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR7535086 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SRR6280200 Sensitive lineage2.2.1 cn
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR7070223 HR-TB lineage3 None
SRR12062526 Pre-XDR-TB lineage2.2.1 None