Rv0667 - c.3189G>C


Drug resistance types
76 Sensitive 34 RR-TB 60 HR-TB 41 MDR-TB 29 Pre-XDR-TB 2 XDR-TB 81 Other
lineage Counts
lineage Count
lineage3.1;lineage9 1
lineage4.9 78
lineage4.1.1.3.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 72
lineage6.1.3 3
lineage4.2.1 3
lineage2.2.2 9
La1.7;lineage4.9;lineage7 3
La2;lineage2.2 1
lineage2.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage3.1.2.1 5
lineage4.3.3 5
lineage4.6.5 1
La3;lineage4.9 10
lineage4.8 9
M.canetti;lineage4.2;lineage4.9 1
La1.2 1
lineage4.9;lineage7 4
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.3.4.2.1 4
La1.7;lineage4.9 5
lineage2.2;lineage4.9 1
lineage2.2.1.1 3
lineage4.4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.5 3
La2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage3 10
lineage4.1.1.3.1 2
lineage4.3.2.1 1
lineage4.4.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage3.1.1 1
lineage4.1.1.3 3
lineage4.1.2.1 2
La1.4 1
M.canetti;lineage4.2 1
La1.2.BCG 3
lineage2.2.2;lineage4 1
lineage4.1.3 1
lineage1.2.2.2 1
lineage4.6.4;lineage4.9 1
lineage3.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.8.1 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.4.1 2
lineage4.1.2 2
lineage4.3.4 1
La3;lineage4 1
lineage4.3.1.1 1
lineage4.2.2.2 2
lineage2.2.1;lineage2.2.2 1
lineage3;lineage4 1
lineage4.1.1.1 2
lineage1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.2.BCG;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.1.1 2
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.1.1 2
lineage4.6 1
lineage1.1.2 2
lineage4.6.1.1 1
lineage2.1;lineage4.9 1
La2;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage1.2.1.2 1
1
lineage5.1.1 1
lineage4.3.3;lineage4.9 1
lineage4.3.4.2 1
lineage6.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2;lineage4 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
lineage4.8.1 1
spoligotype Counts
spoligotype Count
None 323
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR3283040 HR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR15316430 Sensitive lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1062919 HR-TB lineage2.2.1 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6280295 Sensitive lineage2.2.1 cn
ERR7801175 HR-TB lineage4.6.5 None
SRR7069800 Other lineage3.1.2.1 None
ERR3797048 Other La3;lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR7851312 Other La1.2 None
ERR867526 MDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR10315579 Other lineage2.2.1.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR1047996 MDR-TB lineage2.2.2 None
ERR4811628 Sensitive lineage2.2.1 cn
SRR13423649 Sensitive lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
SRR25628598 Sensitive lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR13888750 Other La2 None
SRR16156188 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR3675582 Other lineage4.9 None
SAMN03246590 Pre-XDR-TB lineage2.2.1 cn
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR3675280 RR-TB lineage4.9 None
ERR4811591 Sensitive lineage2.2.1 cn
ERR4814639 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
ERR4596902 MDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR25206955 Pre-XDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR28119827 Other La3;lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
ERR9285979 RR-TB lineage3.1.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR671793 Sensitive lineage2.2.1 cn
ERR502470 RR-TB lineage4.9 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR21277281 Pre-XDR-TB lineage2.2.1 None
ERR3803778 Other lineage6.1.3 None
SRR16278274 Other La1.4 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR6359082 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR1915487 Other La1.2.BCG None
SAMN02360583 HR-TB lineage2.2.2 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR5818672 Other lineage1.2.2.2 None
SRR671748 MDR-TB lineage2.2.1 cn
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11462861 Other La1.8.1 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4817915 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR5341373 Other lineage4.9 None
SRR5007165 Other lineage3 None
SRR3742667 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR12062526 Pre-XDR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR27069432 MDR-TB lineage2.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR5341400 Sensitive lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR6044780 Sensitive lineage4.9 None
SRR1723872 Pre-XDR-TB lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
DRR184982 Other lineage2.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR1013596 Sensitive lineage3 None
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR25207160 MDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4811607 Sensitive lineage2.2.1 cn
ERR067712 Sensitive lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR3675446 RR-TB lineage4.9 None
SRR6280200 Sensitive lineage2.2.1 cn
ERR867567 RR-TB lineage3 None
ERR926160 Sensitive lineage4.9 None
SRR18002976 Other lineage2.2.1 None
ERR4811292 Pre-XDR-TB lineage2.2.1 cn
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR3675230 Other lineage3;lineage4 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR212123 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR926158 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797588 MDR-TB lineage3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR161037 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6280183 Sensitive lineage2.2.1 cn
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR7069319 Other lineage4.5 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR926164 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR14801652 HR-TB lineage4.3.3 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR9787153 Other lineage6.1.3 None
ERR4769419 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR10796598 Other lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4811630 Sensitive lineage2.2.1 cn
ERR4815815 Sensitive lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
SRR27069408 Pre-XDR-TB lineage2.2.1 None
SRR27069407 MDR-TB lineage2.2.1 None
ERR181824 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR25206929 MDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR1181289 Other lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR6045217 Sensitive lineage4.9 None
ERR4811559 Sensitive lineage2.2.1 cn
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR18213736 Other lineage3 None
ERR3275190 Other lineage3 nl
ERR4819314 Other lineage1.1.1 None
SRR1180137 Other lineage2.2.1 None
ERR4816762 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
SRR6044936 Other lineage4.6 None
SRR6045424 Other lineage1.1.2 None
SRR6045359 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR15315797 RR-TB lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR7070223 HR-TB lineage3 None
ERR978765 RR-TB lineage4.8 None
ERR4811318 MDR-TB lineage2.2.1 cn
ERR4811520 Sensitive lineage2.2.1 cn
ERR3797080 Sensitive lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR1735596 RR-TB lineage4.9 None
SRR7069518 Other lineage4.8 None
SRR3675284 Sensitive lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR9029360 MDR-TB lineage2.2.1 None
SRR12062525 Pre-XDR-TB lineage2.2.1 None
SRR5341293 Sensitive lineage4.9 None
ERR2446509 Other lineage3 nl
ERR1063857 MDR-TB La2;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR10040541 MDR-TB lineage2.2.1 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
ERR212138 HR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
SRR7535086 Other None
ERR751336 Sensitive lineage5.1.1 None
SRR21031744 Sensitive lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR10040495 Pre-XDR-TB lineage2.2.1 None
ERR4811558 Sensitive lineage2.2.1 cn
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR3797065 RR-TB lineage4.9 None
SRR28119843 Sensitive lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR6044835 Other lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR1915485 Other La1.2.BCG None
ERR2432997 Other lineage4.8 None
SRR10040176 Pre-XDR-TB lineage2.2.1 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR5311094 HR-TB lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR212125 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR9787030 RR-TB lineage6.1.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR245675 Sensitive lineage1.1.2 None
ERR4810928 Pre-XDR-TB lineage2.2.1 cn
SRR14066533 Sensitive lineage1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR1048987 HR-TB lineage2.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR10040284 Pre-XDR-TB lineage2.2.1 None
SRR1140724 Other lineage2.2.1 None
SRR1723873 Pre-XDR-TB lineage2.2.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR7069097 Other lineage3.1.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR176651 Other lineage4.9 None